RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ZAP70P43403 619 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 MMP14P50281 582 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
CPNE1-206ENST00000412056 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
CPNE1-206ENST00000412056 AOX1Q06278 1338 aa17.05■□□□□ 0.32
CPNE1-206ENST00000412056 CRKP46108 304 aa17.05■□□□□ 0.32
CPNE1-206ENST00000412056 RBM5P52756 815 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■□□ 15.7
CPNE1-206ENST00000412056 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
CPNE1-206ENST00000412056 FSTL1Q12841 308 aa17.05■□□□□ 0.32
CPNE1-206ENST00000412056 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
CPNE1-206ENST00000412056 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
CPNE1-206ENST00000412056 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
CPNE1-206ENST00000412056 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-206ENST00000412056 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
CPNE1-206ENST00000412056 DIXDC1Q155Q3 683 aa17.04■□□□□ 0.32
CPNE1-206ENST00000412056 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
CPNE1-206ENST00000412056 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
CPNE1-206ENST00000412056 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
CPNE1-206ENST00000412056 MTMR14Q8NCE2 650 aa17.04■□□□□ 0.32
CPNE1-206ENST00000412056 OTUD7AQ8TE49 926 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-206ENST00000412056 NEFLP07196 543 aa17.03■□□□□ 0.32
CPNE1-206ENST00000412056 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
CPNE1-206ENST00000412056 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
CPNE1-206ENST00000412056 DZIP1Q86YF9 867 aaKnown RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 TEKT1Q969V4 418 aa17.03■□□□□ 0.32
CPNE1-206ENST00000412056 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 BOLA2Q9H3K6 86 aa17.03■□□□□ 0.32
CPNE1-206ENST00000412056 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-206ENST00000412056 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
CPNE1-206ENST00000412056 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-206ENST00000412056 ATP5JP18859 108 aa17.02■□□□□ 0.32
CPNE1-206ENST00000412056 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.327e-7■■■□□ 18.6
CPNE1-206ENST00000412056 ZNF384Q8TF68 577 aa17.02■□□□□ 0.32
CPNE1-206ENST00000412056 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
CPNE1-206ENST00000412056 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
CPNE1-206ENST00000412056 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
CPNE1-206ENST00000412056 RAI14Q9P0K7 980 aa17.02■□□□□ 0.32
CPNE1-206ENST00000412056 SCAF8Q9UPN6 1271 aaKnown RBP17.02■□□□□ 0.32
CPNE1-206ENST00000412056 DAGLAQ9Y4D2 1042 aa17.02■□□□□ 0.32
CPNE1-206ENST00000412056 SALL3Q9BXA9 1300 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 PITPNM2Q9BZ72 1349 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 ADM5C9JUS6 153 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 TRAF5O00463 557 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 MECOMQ03112 1051 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
CPNE1-206ENST00000412056 ZDHHC15Q96MV8 337 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
CPNE1-206ENST00000412056 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 TDRD3Q9H7E2 651 aaKnown RBP17.01■□□□□ 0.31
CPNE1-206ENST00000412056 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 LRP2BPQ9P2M1 347 aa17.01■□□□□ 0.31
CPNE1-206ENST00000412056 PASKQ96RG2 1323 aa17■□□□□ 0.31
CPNE1-206ENST00000412056 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
CPNE1-206ENST00000412056 KRT26Q7Z3Y9 468 aa17■□□□□ 0.31
CPNE1-206ENST00000412056 USP48Q86UV5 1035 aa17■□□□□ 0.31
CPNE1-206ENST00000412056 GPATCH3Q96I76 525 aa17■□□□□ 0.31
CPNE1-206ENST00000412056 AK9Q5TCS8 1911 aa17■□□□□ 0.31
CPNE1-206ENST00000412056 GAKO14976 1311 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 GOLIM4O00461 696 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 MYO1BO43795 1136 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 MX1P20591 662 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 NUCB1Q02818 461 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 APOBEC3HQ6NTF7 200 aaKnown RBP16.99■□□□□ 0.31
CPNE1-206ENST00000412056 CHD1LQ86WJ1 897 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 NSUN4Q96CB9 384 aaKnown RBP16.99■□□□□ 0.31
CPNE1-206ENST00000412056 HAUS7Q99871 368 aa16.99■□□□□ 0.31
CPNE1-206ENST00000412056 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
CPNE1-206ENST00000412056 MROH7-TTC4A0A0A0MT08 1334 aa16.98■□□□□ 0.31
CPNE1-206ENST00000412056 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
CPNE1-206ENST00000412056 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
CPNE1-206ENST00000412056 APOBEC3FQ8IUX4 373 aaKnown RBP16.98■□□□□ 0.31
CPNE1-206ENST00000412056 VEZTQ9HBM0 779 aa16.98■□□□□ 0.31
CPNE1-206ENST00000412056 CACNB3P54284 484 aa16.97■□□□□ 0.31
CPNE1-206ENST00000412056 NAA16Q6N069 864 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-206ENST00000412056 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
CPNE1-206ENST00000412056 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
CPNE1-206ENST00000412056 FAM163AQ96GL9 167 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-206ENST00000412056 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
CPNE1-206ENST00000412056 BTDP43251 543 aa16.96■□□□□ 0.31
CPNE1-206ENST00000412056 GSTO1P78417 241 aa16.96■□□□□ 0.31
CPNE1-206ENST00000412056 TTF1Q15361 905 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-206ENST00000412056 CDC42EP5Q6NZY7 148 aa16.96■□□□□ 0.31
CPNE1-206ENST00000412056 TCP10L2B9ZVM9 353 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms