RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TFCP2Q12800 502 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 PRKG1Q13976 671 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 TTLL12Q14166 644 aaPredicted RBP21.99■■□□□ 1.11
LSM5-204ENST00000409909 SPDYE2Q495Y8 402 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 RASAL3Q86YV0 1011 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 FTSJ3Q8IY81 847 aaKnown RBP21.99■■□□□ 1.11
LSM5-204ENST00000409909 TSKSQ9UJT2 592 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 FZD1Q9UP38 647 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 PHKA1P46020 1223 aa21.98■■□□□ 1.11
LSM5-204ENST00000409909 TIMM10P62072 90 aa21.98■■□□□ 1.11
LSM5-204ENST00000409909 HDLBPQ00341 1268 aaKnown RBP21.98■■□□□ 1.11
LSM5-204ENST00000409909 PPP2R3BQ9Y5P8 575 aa21.98■■□□□ 1.11
LSM5-204ENST00000409909 SSC5DA1L4H1 1573 aa21.97■■□□□ 1.11
LSM5-204ENST00000409909 ZBTB7BO15156 539 aaPredicted RBP21.97■■□□□ 1.11
LSM5-204ENST00000409909 RASA3Q14644 834 aa21.97■■□□□ 1.11
LSM5-204ENST00000409909 MRIQ9BWK5 157 aa21.97■■□□□ 1.11
LSM5-204ENST00000409909 MYH13Q9UKX3 1938 aa21.97■■□□□ 1.11
LSM5-204ENST00000409909 NBPF12Q5TAG4 269 aaPredicted RBP21.96■■□□□ 1.11
LSM5-204ENST00000409909 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
LSM5-204ENST00000409909 WDR66Q8TBY9 1149 aa21.96■■□□□ 1.11
LSM5-204ENST00000409909 TEKT1Q969V4 418 aa21.96■■□□□ 1.11
LSM5-204ENST00000409909 CSRNP1Q96S65 589 aa21.96■■□□□ 1.11
LSM5-204ENST00000409909 SUGT1Q9Y2Z0 365 aa21.96■■□□□ 1.11
LSM5-204ENST00000409909 LDLRAD1Q5T700 205 aa21.95■■□□□ 1.1
LSM5-204ENST00000409909 CCDC102BQ68D86 513 aa21.95■■□□□ 1.1
LSM5-204ENST00000409909 ARMC9Q7Z3E5 817 aa21.95■■□□□ 1.1
LSM5-204ENST00000409909 C1orf115Q9H7X2 142 aa21.95■■□□□ 1.1
LSM5-204ENST00000409909 GNL3LQ9NVN8 582 aaKnown RBP21.95■■□□□ 1.1
LSM5-204ENST00000409909 A0A1B0GUL7 405 aa21.94■■□□□ 1.1
LSM5-204ENST00000409909 CA12O43570 354 aa21.94■■□□□ 1.1
LSM5-204ENST00000409909 ATP8B2P98198 1209 aa21.94■■□□□ 1.1
LSM5-204ENST00000409909 POLA2Q14181 598 aa21.94■■□□□ 1.1
LSM5-204ENST00000409909 PANK1Q8TE04 598 aa21.94■■□□□ 1.1
LSM5-204ENST00000409909 ZDHHC15Q96MV8 337 aa21.94■■□□□ 1.1
LSM5-204ENST00000409909 ANGEL1Q9UNK9 670 aaKnown RBP21.94■■□□□ 1.1
LSM5-204ENST00000409909 TCP10L2B9ZVM9 353 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 SUPT20HL1Q3ZLR7 823 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 APOBEC3HQ6NTF7 200 aaKnown RBP21.93■■□□□ 1.1
LSM5-204ENST00000409909 CDAN1Q8IWY9 1227 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 SSH3Q8TE77 659 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 XAGE2Q96GT9 111 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 TEPSINQ96N21 525 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 AKAP2Q9Y2D5 859 aa21.93■■□□□ 1.1
LSM5-204ENST00000409909 MAST3O60307 1309 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 SEMA3EO15041 775 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 ZBTB22O15209 634 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 PRDX5P30044 214 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 G3BP1Q13283 466 aaKnown RBP eCLIP21.92■■□□□ 1.1
LSM5-204ENST00000409909 TNFAIP1Q13829 316 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 MAP3K11Q16584 847 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 HHIPL2Q6UWX4 724 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 DENND2AQ9ULE3 1009 aa21.92■■□□□ 1.1
LSM5-204ENST00000409909 SALL1Q9NSC2 1324 aa21.91■■□□□ 1.1
LSM5-204ENST00000409909 CACNB3P54284 484 aa21.91■■□□□ 1.1
LSM5-204ENST00000409909 RASGRF1Q13972 1273 aa21.91■■□□□ 1.1
LSM5-204ENST00000409909 TMEM39BQ9GZU3 492 aa21.91■■□□□ 1.1
LSM5-204ENST00000409909 RNF186Q9NXI6 227 aa21.91■■□□□ 1.1
LSM5-204ENST00000409909 PPP1R12BO60237 982 aaPredicted RBP21.9■■□□□ 1.1
LSM5-204ENST00000409909 USP2O75604 605 aaPredicted RBP21.9■■□□□ 1.1
LSM5-204ENST00000409909 DIXDC1Q155Q3 683 aa21.9■■□□□ 1.1
LSM5-204ENST00000409909 CLMNQ96JQ2 1002 aa21.9■■□□□ 1.1
LSM5-204ENST00000409909 NEUROD6Q96NK8 337 aa21.9■■□□□ 1.1
LSM5-204ENST00000409909 MKRN3Q13064 507 aaKnown RBP21.89■■□□□ 1.09
LSM5-204ENST00000409909 AKAP11Q9UKA4 1901 aa21.88■■□□□ 1.09
LSM5-204ENST00000409909 TRPA1O75762 1119 aa21.88■■□□□ 1.09
LSM5-204ENST00000409909 LDHBP07195 334 aaKnown RBP21.88■■□□□ 1.09
LSM5-204ENST00000409909 MVPQ14764 893 aaKnown RBP21.88■■□□□ 1.09
LSM5-204ENST00000409909 REM2Q8IYK8 340 aaPredicted RBP21.88■■□□□ 1.09
LSM5-204ENST00000409909 SAGE1Q9NXZ1 904 aa21.88■■□□□ 1.09
LSM5-204ENST00000409909 DAGLAQ9Y4D2 1042 aa21.88■■□□□ 1.09
LSM5-204ENST00000409909 CASP8AP2Q9UKL3 1982 aa21.88■■□□□ 1.09
LSM5-204ENST00000409909 PDS5AQ29RF7 1337 aaKnown RBP21.87■■□□□ 1.09
LSM5-204ENST00000409909 TNNI2P48788 182 aa21.87■■□□□ 1.09
LSM5-204ENST00000409909 SLC10A4Q96EP9 437 aa21.87■■□□□ 1.09
LSM5-204ENST00000409909 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
LSM5-204ENST00000409909 SURF6O75683 361 aaKnown RBP21.86■■□□□ 1.09
LSM5-204ENST00000409909 FKBP1CQ5VVH2 108 aa21.86■■□□□ 1.09
LSM5-204ENST00000409909 SPRYD7Q5W111 196 aa21.86■■□□□ 1.09
LSM5-204ENST00000409909 CEP85Q6P2H3 762 aa21.86■■□□□ 1.09
LSM5-204ENST00000409909 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.86■■□□□ 1.09
LSM5-204ENST00000409909 NOP58Q9Y2X3 529 aaKnown RBP21.86■■□□□ 1.09
LSM5-204ENST00000409909 UNCXA6NJT0 531 aa21.85■■□□□ 1.09
LSM5-204ENST00000409909 IREB2P48200 963 aaKnown RBP21.85■■□□□ 1.09
LSM5-204ENST00000409909 TM4SF4P48230 202 aa21.85■■□□□ 1.09
LSM5-204ENST00000409909 CDC42EP5Q6NZY7 148 aa21.85■■□□□ 1.09
LSM5-204ENST00000409909 FAM83AQ86UY5 434 aa21.85■■□□□ 1.09
LSM5-204ENST00000409909 TMOD2Q9NZR1 351 aa21.85■■□□□ 1.09
LSM5-204ENST00000409909 HMG20BQ9P0W2 317 aa21.85■■□□□ 1.09
LSM5-204ENST00000409909 CAPN15O75808 1086 aa21.84■■□□□ 1.09
LSM5-204ENST00000409909 MS4A1P11836 297 aa21.84■■□□□ 1.09
LSM5-204ENST00000409909 GORABQ5T7V8 394 aa21.84■■□□□ 1.09
LSM5-204ENST00000409909 PI16Q6UXB8 463 aa21.84■■□□□ 1.09
LSM5-204ENST00000409909 ZGPATQ8N5A5 531 aaKnown RBP21.84■■□□□ 1.09
LSM5-204ENST00000409909 GPR108Q9NPR9 543 aa21.84■■□□□ 1.09
LSM5-204ENST00000409909 ABCF2Q9UG63 623 aa21.84■■□□□ 1.09
LSM5-204ENST00000409909 ARID4AP29374 1257 aaPredicted RBP21.83■■□□□ 1.09
LSM5-204ENST00000409909 OS9Q13438 667 aaPredicted RBP21.83■■□□□ 1.09
LSM5-204ENST00000409909 TNNI3KQ59H18 835 aa21.83■■□□□ 1.09
LSM5-204ENST00000409909 WNK4Q96J92 1243 aa21.83■■□□□ 1.09
LSM5-204ENST00000409909 FPGT-TNNI3KV9GXZ4 949 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms