RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 KINO60870 393 aaKnown RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 CPDO75976 1380 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 CDKL5O76039 1030 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 LMOD1P29536 600 aaPredicted RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 BRPF1P55201 1214 aaPredicted RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 SSRP1Q08945 709 aaKnown RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 SASS6Q6UVJ0 657 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 PHKBQ93100 1093 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
SNX13-202ENST00000409604 NEURL4Q96JN8 1562 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
SNX13-202ENST00000409604 GSE1Q14687 1217 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 AOC3Q16853 763 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
SNX13-202ENST00000409604 FGAP02671 866 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 MCAMP43121 646 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 FOXO4P98177 505 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 TTLL6Q8N841 843 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 TNPO1Q92973 898 aaKnown RBP13.28□□□□□ -0.28
SNX13-202ENST00000409604 COL5A2P05997 1499 aaPredicted RBP13.28□□□□□ -0.28
SNX13-202ENST00000409604 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
SNX13-202ENST00000409604 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
SNX13-202ENST00000409604 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
SNX13-202ENST00000409604 OSBP2Q969R2 916 aa13.28□□□□□ -0.28
SNX13-202ENST00000409604 XDHP47989 1333 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 BTDP43251 543 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 GRAPQ13588 217 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 RTN1Q16799 776 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 MIGA2Q7L4E1 593 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 CPXCR1Q8N123 301 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.28
SNX13-202ENST00000409604 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.28
SNX13-202ENST00000409604 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
SNX13-202ENST00000409604 TFAP4Q01664 338 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 GOLGA8HP0CJ92 632 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 SP4Q02446 784 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 DHX32Q7L7V1 743 aaKnown RBP13.27□□□□□ -0.29
SNX13-202ENST00000409604 CKAP2LQ8IYA6 745 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 HAUS7Q99871 368 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 ALG1Q9BT22 464 aa13.27□□□□□ -0.29
SNX13-202ENST00000409604 DCCP43146 1447 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 STX6O43752 255 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
SNX13-202ENST00000409604 MCM4P33991 863 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
SNX13-202ENST00000409604 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
SNX13-202ENST00000409604 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
SNX13-202ENST00000409604 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 GOLGA6L6A8MZA4 724 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
SNX13-202ENST00000409604 TEKT1Q969V4 418 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 KRT23Q9C075 422 aa13.26□□□□□ -0.29
SNX13-202ENST00000409604 CCDC194A0A1B0GVG4 234 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 BIN1O00499 593 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 JAK2O60674 1132 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 BBOX1O75936 387 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 ZNF396Q96N95 335 aaPredicted RBP13.25□□□□□ -0.29
SNX13-202ENST00000409604 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 CAMTA1Q9Y6Y1 1673 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 KLRK1P26718 216 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
SNX13-202ENST00000409604 LCORLQ8N3X6 602 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 DYNLL2Q96FJ2 89 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 M0R2C6 588 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 POLA2Q14181 598 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 ARID3AQ99856 593 aa13.25□□□□□ -0.29
SNX13-202ENST00000409604 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
SNX13-202ENST00000409604 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 IFNL3Q8IZI9 196 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 MSNP26038 577 aaKnown RBP13.24□□□□□ -0.29
SNX13-202ENST00000409604 GPSM2P81274 684 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 SH2B1Q9NRF2 756 aaPredicted RBP13.24□□□□□ -0.29
SNX13-202ENST00000409604 TBC1D10BQ4KMP7 808 aaPredicted RBP13.24□□□□□ -0.29
SNX13-202ENST00000409604 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 E7EWF7 191 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 TPM4P67936 248 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 LRRC47Q8N1G4 583 aaKnown RBP13.24□□□□□ -0.29
SNX13-202ENST00000409604 PLIN2Q99541 437 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms