RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ABCF2Q9UG63 623 aa24.41■■□□□ 1.5
USP39-203ENST00000409470 FIBPO43427 364 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 PDIA3P30101 505 aaKnown RBP24.4■■□□□ 1.5
USP39-203ENST00000409470 ZNF445P59923 1031 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 CSPP1Q1MSJ5 1256 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 FERMT3Q86UX7 667 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 ALX1Q15699 326 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 CNBD1Q8NA66 436 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 SMARCC2Q8TAQ2 1214 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 CHMP4CQ96CF2 233 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 FAM84BQ96KN1 310 aaPredicted RBP24.4■■□□□ 1.5
USP39-203ENST00000409470 NBPF3Q9H094 633 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 NAPBQ9H115 298 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 TMEM63CQ9P1W3 806 aa24.4■■□□□ 1.5
USP39-203ENST00000409470 TRIM37O94972 964 aa24.39■■□□□ 1.5
USP39-203ENST00000409470 SLC27A3Q5K4L6 730 aa24.39■■□□□ 1.5
USP39-203ENST00000409470 TBC1D10CQ8IV04 446 aa24.39■■□□□ 1.5
USP39-203ENST00000409470 IFNL3Q8IZI9 196 aa24.39■■□□□ 1.5
USP39-203ENST00000409470 NSUN7Q8NE18 718 aaKnown RBP24.39■■□□□ 1.5
USP39-203ENST00000409470 GPHNQ9NQX3 736 aaPredicted RBP24.39■■□□□ 1.5
USP39-203ENST00000409470 RAI14Q9P0K7 980 aa24.39■■□□□ 1.5
USP39-203ENST00000409470 DENND2AQ9ULE3 1009 aa24.39■■□□□ 1.5
USP39-203ENST00000409470 NCOA5Q9HCD5 579 aaKnown RBP24.39■■□□□ 1.49
USP39-203ENST00000409470 ZMYM6O95789 1325 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 WDR19Q8NEZ3 1342 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 H3BQV1 296 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 GNAT2P19087 354 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 CYP7A1P22680 504 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 TM4SF1P30408 202 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 ANTXR2P58335 489 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 HMGN5P82970 282 aaKnown RBP24.38■■□□□ 1.49
USP39-203ENST00000409470 IFFO2Q5TF58 517 aa24.38■■□□□ 1.49
USP39-203ENST00000409470 PTPDC1A2A3K4 754 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 EVCP57679 992 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 LCORLQ8N3X6 602 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 MIGA1Q8NAN2 632 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 SYAP1Q96A49 352 aaPredicted RBP24.37■■□□□ 1.49
USP39-203ENST00000409470 EPB41L4AQ9HCS5 686 aaPredicted RBP24.37■■□□□ 1.49
USP39-203ENST00000409470 KIF3AQ9Y496 699 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 SLC4A4Q9Y6R1 1079 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 PNPLA7Q6ZV29 1317 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 CTDNEP1O95476 244 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 NACAP1Q9BZK3 213 aa24.37■■□□□ 1.49
USP39-203ENST00000409470 FBXO33Q7Z6M2 555 aa24.36■■□□□ 1.49
USP39-203ENST00000409470 COL1A1P02452 1464 aaPredicted RBP24.36■■□□□ 1.49
USP39-203ENST00000409470 KLF18A0A0U1RQI7 1052 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 GSG1L2A8MUP6 293 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 KLRK1P26718 216 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 UBE2HP62256 183 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 PANK2Q9BZ23 570 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 TNRC6CQ9HCJ0 1690 aaKnown RBP24.35■■□□□ 1.49
USP39-203ENST00000409470 BRWD3Q6RI45 1802 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 SEMA3EO15041 775 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 PRKAB2O43741 272 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 TDO2P48775 406 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 KRT85P78386 507 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 TPRNQ4KMQ1 711 aa24.35■■□□□ 1.49
USP39-203ENST00000409470 HIBADHP31937 336 aaKnown RBP24.34■■□□□ 1.49
USP39-203ENST00000409470 TFCP2L1Q9NZI6 479 aa24.34■■□□□ 1.49
USP39-203ENST00000409470 UBR3Q6ZT12 1888 aa24.34■■□□□ 1.49
USP39-203ENST00000409470 GOLGA8BA8MQT2 603 aa24.34■■□□□ 1.49
USP39-203ENST00000409470 GYS1P13807 737 aa24.34■■□□□ 1.49
USP39-203ENST00000409470 B4E1Z4 1266 aa24.33■■□□□ 1.49
USP39-203ENST00000409470 GRAPQ13588 217 aa24.33■■□□□ 1.49
USP39-203ENST00000409470 FAM173BQ6P4H8 233 aa24.33■■□□□ 1.49
USP39-203ENST00000409470 CYB5R4Q7L1T6 521 aa24.33■■□□□ 1.49
USP39-203ENST00000409470 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
USP39-203ENST00000409470 MAGEB6P1A0A0J9YX57 407 aa24.32■■□□□ 1.48
USP39-203ENST00000409470 SYCE3A1L190 88 aa24.32■■□□□ 1.48
USP39-203ENST00000409470 DHX16O60231 1041 aaKnown RBP24.32■■□□□ 1.48
USP39-203ENST00000409470 CTDSPL2Q05D32 466 aa24.32■■□□□ 1.48
USP39-203ENST00000409470 PRR5LQ6MZQ0 368 aa24.32■■□□□ 1.48
USP39-203ENST00000409470 NEDD4P46934 1319 aa24.32■■□□□ 1.48
USP39-203ENST00000409470 ADGRA1Q86SQ6 560 aa24.32■■□□□ 1.48
USP39-203ENST00000409470 ANGEL1Q9UNK9 670 aaKnown RBP24.32■■□□□ 1.48
USP39-203ENST00000409470 FOSBP53539 338 aa24.31■■□□□ 1.48
USP39-203ENST00000409470 ANKIB1Q9P2G1 1089 aa24.31■■□□□ 1.48
USP39-203ENST00000409470 SALL1Q9NSC2 1324 aa24.31■■□□□ 1.48
USP39-203ENST00000409470 PPFIA3O75145 1194 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 ST5P78524 1137 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 NAA16Q6N069 864 aaPredicted RBP24.3■■□□□ 1.48
USP39-203ENST00000409470 RPGRQ92834 1020 aaKnown RBP24.3■■□□□ 1.48
USP39-203ENST00000409470 RESTQ13127 1097 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 LRSAM1Q6UWE0 723 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 TMEM87BQ96K49 555 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 ZSCAN16Q9H4T2 348 aaPredicted RBP24.3■■□□□ 1.48
USP39-203ENST00000409470 CNNM2Q9H8M5 875 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 INCENPQ9NQS7 918 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 HPS5Q9UPZ3 1129 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 EP400Q96L91 3159 aa24.3■■□□□ 1.48
USP39-203ENST00000409470 SH2B2O14492 632 aaPredicted RBP24.29■■□□□ 1.48
USP39-203ENST00000409470 SERPINB2P05120 415 aa24.29■■□□□ 1.48
USP39-203ENST00000409470 AKNAD1Q5T1N1 836 aa24.29■■□□□ 1.48
USP39-203ENST00000409470 MFSD6Q6ZSS7 791 aa24.29■■□□□ 1.48
USP39-203ENST00000409470 RAB11FIP4Q86YS3 637 aa24.29■■□□□ 1.48
USP39-203ENST00000409470 NKX2-3Q8TAU0 364 aa24.29■■□□□ 1.48
USP39-203ENST00000409470 CPLX1O14810 134 aa24.28■■□□□ 1.48
USP39-203ENST00000409470 CHAF1AQ13111 956 aaPredicted RBP24.28■■□□□ 1.48
USP39-203ENST00000409470 TXNRD1Q16881 649 aa24.28■■□□□ 1.48
USP39-203ENST00000409470 KRT23Q9C075 422 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms