RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
CHRNA1-204ENST00000409323 SLC9C2Q5TAH2 1124 aa17.08■□□□□ 0.32
CHRNA1-204ENST00000409323 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.32
CHRNA1-204ENST00000409323 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
CHRNA1-204ENST00000409323 GMLQ99445 158 aa17.08■□□□□ 0.32
CHRNA1-204ENST00000409323 PDE6AP16499 860 aa17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 GPC2Q8N158 579 aa17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
CHRNA1-204ENST00000409323 EGFRP00533 1210 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 CYP7A1P22680 504 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 DPY19L2Q6NUT2 758 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 MIGA1Q8NAN2 632 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 SEC62Q99442 399 aaKnown RBP17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 EPS15P42566 896 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 FAM227BQ96M60 508 aa17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
CHRNA1-204ENST00000409323 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 GLTPD2A6NH11 291 aa17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 ZBTB22O15209 634 aa17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 ADD2P35612 726 aa17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.05■□□□□ 0.32
CHRNA1-204ENST00000409323 A0A0D9SFI3 127 aa17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 TCRBV5S4A2TA0A5A2 114 aa17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 RNF113AO15541 343 aaKnown RBP17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 CRKP46108 304 aa17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 DYNLL1P63167 89 aaKnown RBP17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 IL25Q9H293 177 aa17.04■□□□□ 0.32
CHRNA1-204ENST00000409323 M0R2C6 588 aa17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 PUS7LQ9H0K6 701 aaKnown RBP17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 GPRC5DQ9NZD1 345 aa17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
CHRNA1-204ENST00000409323 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 TRPM4Q8TD43 1214 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 SUGT1Q9Y2Z0 365 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 ZC3H4Q9UPT8 1303 aaKnown RBP17.02■□□□□ 0.32
CHRNA1-204ENST00000409323 CHMLP26374 656 aa17.02■□□□□ 0.31
CHRNA1-204ENST00000409323 BTDP43251 543 aa17.02■□□□□ 0.31
CHRNA1-204ENST00000409323 DPF2Q92785 391 aa17.02■□□□□ 0.31
CHRNA1-204ENST00000409323 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.31
CHRNA1-204ENST00000409323 MAST3O60307 1309 aa17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 ASTN2O75129 1339 aaPredicted RBP17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 CACNB3P54284 484 aa17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 NBPF9Q3BBW0 867 aa17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
CHRNA1-204ENST00000409323 CLRN2A0PK11 232 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 POTECB2RU33 542 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 H7C1D1 291 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 MBD4O95243 580 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 GSTO1P78417 241 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 DLGAP5Q15398 846 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
CHRNA1-204ENST00000409323 LCORLQ8N3X6 602 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 APPBP2Q92624 585 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 TDRD3Q9H7E2 651 aaKnown RBP17■□□□□ 0.31
CHRNA1-204ENST00000409323 RRAGCQ9HB90 399 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 NMRK2Q9NPI5 230 aa17■□□□□ 0.31
CHRNA1-204ENST00000409323 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 CDC45O75419 566 aa16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 ZNF280AP59817 542 aaPredicted RBP16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 APOBEC3HQ6NTF7 200 aaKnown RBP16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 SERPINA10Q9UK55 444 aa16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 GAKO14976 1311 aa16.99■□□□□ 0.31
CHRNA1-204ENST00000409323 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 HHIPL2Q6UWX4 724 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 L3MBTL3Q96JM7 780 aaPredicted RBP16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 HACL1Q9UJ83 578 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms