RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 GBA2Q9HCG7 927 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 MAST3O60307 1309 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 COL1A1P02452 1464 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 ZBTB22O15209 634 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 HSP90AB4PQ58FF6 505 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 ERC1Q8IUD2 1116 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 SIRT2Q8IXJ6 389 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 TEKT1Q969V4 418 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 MRIQ9BWK5 157 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 VEZTQ9HBM0 779 aa22.08■■□□□ 1.12
PDLIM2-206ENST00000409141 LDHBP07195 334 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-206ENST00000409141 HUNKP57058 714 aa22.07■■□□□ 1.12
PDLIM2-206ENST00000409141 TDRD3Q9H7E2 651 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-206ENST00000409141 ARAP2Q8WZ64 1704 aa22.07■■□□□ 1.12
PDLIM2-206ENST00000409141 AOX1Q06278 1338 aa22.07■■□□□ 1.12
PDLIM2-206ENST00000409141 SALL1Q9NSC2 1324 aa22.07■■□□□ 1.12
PDLIM2-206ENST00000409141 PRDX5P30044 214 aa22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 GRM1Q13255 1194 aa22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 CCDC158Q5M9N0 1113 aa22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 ZGPATQ8N5A5 531 aaKnown RBP22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 DBNDD2Q9BQY9 259 aa22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 DEFB129Q9H1M3 183 aa22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 ZNF70Q9UC06 446 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-206ENST00000409141 UQCRFS1P1P0C7P4 283 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 NF2P35240 595 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 SPDYE2Q495Y8 402 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 CYP4F22Q6NT55 531 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 HHIPL2Q6UWX4 724 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 HMG20BQ9P0W2 317 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 ABCF2Q9UG63 623 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 PDS5AQ29RF7 1337 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 WDR33Q9C0J8 1336 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 MYH13Q9UKX3 1938 aa22.05■■□□□ 1.12
PDLIM2-206ENST00000409141 APBB1O00213 710 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 ARID4AP29374 1257 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 ECE1P42892 770 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 TTC39AQ5SRH9 613 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 SPATA5Q8NB90 893 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 EAF2Q96CJ1 260 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 HHIPL1Q96JK4 782 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 CAPNS2Q96L46 248 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 ZDHHC15Q96MV8 337 aa22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 CCDC8Q9H0W5 538 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-206ENST00000409141 SPTY2D1Q68D10 685 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-206ENST00000409141 RHPN1Q8TCX5 695 aa22.03■■□□□ 1.12
PDLIM2-206ENST00000409141 PPP2R3BQ9Y5P8 575 aa22.03■■□□□ 1.12
PDLIM2-206ENST00000409141 FKBP1BP68106 108 aa22.03■■□□□ 1.12
PDLIM2-206ENST00000409141 DIXDC1Q155Q3 683 aa22.03■■□□□ 1.12
PDLIM2-206ENST00000409141 PI16Q6UXB8 463 aa22.03■■□□□ 1.12
PDLIM2-206ENST00000409141 MCAMP43121 646 aa22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 TNFAIP1Q13829 316 aa22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 TTLL12Q14166 644 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 RASA3Q14644 834 aa22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 APOBEC3HQ6NTF7 200 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 IL1RAPL2Q9NP60 686 aa22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 DBNLQ9UJU6 430 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-206ENST00000409141 TCP10L2B9ZVM9 353 aa22.01■■□□□ 1.11
PDLIM2-206ENST00000409141 RAB11FIP3O75154 756 aa22.01■■□□□ 1.11
PDLIM2-206ENST00000409141 AACSQ86V21 672 aa22.01■■□□□ 1.11
PDLIM2-206ENST00000409141 KIF1BPQ96EK5 621 aa22.01■■□□□ 1.11
PDLIM2-206ENST00000409141 TLR7Q9NYK1 1049 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-206ENST00000409141 PRKG1Q13976 671 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 RGMBQ6NW40 437 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 MOB2Q70IA6 237 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 ERICH6Q7L0X2 663 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 DZIP1Q86YF9 867 aaKnown RBP22■■□□□ 1.11
PDLIM2-206ENST00000409141 BCL11AQ9H165 835 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 SNRKQ9NRH2 765 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 TMOD2Q9NZR1 351 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 DAGLAQ9Y4D2 1042 aa22■■□□□ 1.11
PDLIM2-206ENST00000409141 UBE2Q2LH0YL09 131 aa21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 TNNI2P48788 182 aa21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 ZNF157P51786 506 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 SUPT20HL1Q3ZLR7 823 aa21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 TBC1D9Q6ZT07 1266 aa21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 CLASRPQ8N2M8 674 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 ZNF512BQ96KM6 892 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 ECM29Q5VYK3 1845 aa21.99■■□□□ 1.11
PDLIM2-206ENST00000409141 CACNB3P54284 484 aa21.98■■□□□ 1.11
PDLIM2-206ENST00000409141 SLF2Q8IX21 1173 aa21.98■■□□□ 1.11
PDLIM2-206ENST00000409141 CRBNQ96SW2 442 aa21.98■■□□□ 1.11
PDLIM2-206ENST00000409141 NBPF12Q5TAG4 269 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-206ENST00000409141 ARMC9Q7Z3E5 817 aa21.97■■□□□ 1.11
PDLIM2-206ENST00000409141 RAI14Q9P0K7 980 aa21.97■■□□□ 1.11
PDLIM2-206ENST00000409141 AOC2O75106 756 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 MECOMQ03112 1051 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 CCDC102AQ96A19 550 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 LRP2BPQ9P2M1 347 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 IFIT2P09913 472 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 HSPA1AP0DMV8 641 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 HSPA1BP0DMV9 641 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 MAP2K2P36507 400 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 FKBP1CQ5VVH2 108 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 CDC42EP5Q6NZY7 148 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 TMEM39BQ9GZU3 492 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 USP40Q9NVE5 1235 aa21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 ANGEL1Q9UNK9 670 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-206ENST00000409141 PAPPA2Q9BXP8 1791 aa21.95■■□□□ 1.1
PDLIM2-206ENST00000409141 PPP1R12BO60237 982 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-206ENST00000409141 FAM163AQ96GL9 167 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms