RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 PLIN1O60240 522 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 ALDH1L1O75891 902 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 FKBP1AP62942 108 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 IFNL1Q8IU54 200 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 ZNF594Q96JF6 807 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 ZNF333Q96JL9 665 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 CNNM1Q9NRU3 951 aa11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-203ENST00000409129 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-203ENST00000409129 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-203ENST00000409129 CFAP100Q494V2 611 aa11.6□□□□□ -0.55
NIF3L1-203ENST00000409129 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
NIF3L1-203ENST00000409129 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-203ENST00000409129 PCDHAC2Q9Y5I4 1007 aa11.6□□□□□ -0.55
NIF3L1-203ENST00000409129 COL1A1P02452 1464 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 SOX1O00570 391 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 MYO1BO43795 1136 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 CRHR2Q13324 411 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 MAP3K11Q16584 847 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 PRMT6Q96LA8 375 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 SRCIN1Q9C0H9 1055 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
NIF3L1-203ENST00000409129 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.55
NIF3L1-203ENST00000409129 CLRN2A0PK11 232 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 INHBEP58166 350 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 UBE4AQ14139 1066 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 SLC4A8Q2Y0W8 1093 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 ERO1AQ96HE7 468 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 LRCH3Q96II8 777 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 JAG2Q9Y219 1238 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 FAM205AQ6ZU69 1335 aa11.58□□□□□ -0.56
NIF3L1-203ENST00000409129 UNCXA6NJT0 531 aa11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 ALDH1A1P00352 501 aa11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 HIBADHP31937 336 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 RBM5P52756 815 aaKnown RBP eCLIP11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 KAZALD1Q96I82 304 aa11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 PUS3Q9BZE2 481 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 AOX1Q06278 1338 aa11.57□□□□□ -0.56
NIF3L1-203ENST00000409129 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 NBPF7P0C2Y1 421 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 ZBTB48P10074 688 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 GJA5P36382 358 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 GYG1P46976 350 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 SLC9C1Q4G0N8 1177 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 MFSD14BQ5SR56 506 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 NBPF12Q5TAG4 269 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 PRO3102Q9H379 93 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 UTYO14607 1347 aa11.56□□□□□ -0.56
NIF3L1-203ENST00000409129 A0A1B0GUL6 1792 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 IREB2P48200 963 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 RASA3Q14644 834 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 DPF3Q92784 378 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 SHISA4Q96DD7 197 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 PTPN18Q99952 460 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 ZNF70Q9UC06 446 aaPredicted RBP11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 TTF2Q9UNY4 1162 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 MROH5Q6ZUA9 1318 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 ZNF521Q96K83 1311 aa11.55□□□□□ -0.56
NIF3L1-203ENST00000409129 SP3Q02447 781 aa11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 TNFAIP1Q13829 316 aa11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 FBXO33Q7Z6M2 555 aa11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-203ENST00000409129 VCANP13611 3396 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 MGAMO43451 1857 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 LRRC24Q50LG9 513 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 VPS37DQ86XT2 251 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 ANKRD13AQ8IZ07 590 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 ANKRD44Q8N8A2 993 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 ARHGAP39Q9C0H5 1083 aa11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-203ENST00000409129 CRKP46108 304 aa11.52□□□□□ -0.57
NIF3L1-203ENST00000409129 CAVIN4Q5BKX8 364 aa11.52□□□□□ -0.57
NIF3L1-203ENST00000409129 METTL24Q5JXM2 366 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms