RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ECM29Q5VYK3 1845 aa15.95■□□□□ 0.14
SNORD88B-201ENST00000408454 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
SNORD88B-201ENST00000408454 AKAP11Q9UKA4 1901 aa15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 RASA3Q14644 834 aa15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 INTS3Q68E01 1043 aaKnown RBP15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 HHIPL2Q6UWX4 724 aa15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 CTU1Q7Z7A3 348 aaKnown RBP15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 FAM83AQ86UY5 434 aa15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 PRMT6Q96LA8 375 aaPredicted RBP15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 PUS3Q9BZE2 481 aaKnown RBP15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
SNORD88B-201ENST00000408454 CLRN2A0PK11 232 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 CCDC85CA6NKD9 419 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 IGSF3O75054 1194 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 MVPQ14764 893 aaKnown RBP15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 LRRC24Q50LG9 513 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 SPRYD7Q5W111 196 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 VGLL2Q8N8G2 317 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 ZDHHC15Q96MV8 337 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 COPRSQ9NQ92 184 aa15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 ZNF70Q9UC06 446 aaPredicted RBP15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 POLR2AP24928 1970 aaKnown RBP15.93■□□□□ 0.14
SNORD88B-201ENST00000408454 SNAP23O00161 211 aa15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 GNAI2P04899 355 aa15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 MCOLN1Q9GZU1 580 aa15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 CHMP4BQ9H444 224 aaKnown RBP15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 TSKSQ9UJT2 592 aa15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 PDS5AQ29RF7 1337 aaKnown RBP15.92■□□□□ 0.14
SNORD88B-201ENST00000408454 RPAP1Q9BWH6 1393 aaPredicted RBP15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 LDHBP07195 334 aaKnown RBP15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 FGFR2P21802 821 aa15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 PRKG1Q13976 671 aa15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 GORABQ5T7V8 394 aa15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 LRRFIP2Q9Y608 721 aaKnown RBP15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
SNORD88B-201ENST00000408454 ZNF646O15015 1829 aaPredicted RBP15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 MAP4K4O95819 1239 aaPredicted RBP15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 MTX1Q13505 466 aa15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 PRAMEF18Q5VWM3 479 aa15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 DLK2Q6UY11 383 aa15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 TDRD3Q9H7E2 651 aaKnown RBP15.9■□□□□ 0.14
SNORD88B-201ENST00000408454 FKTNO75072 461 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 BCAMP50895 628 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 GTF2A2P52657 109 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 GSTO1P78417 241 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 ERO1AQ96HE7 468 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 WNK4Q96J92 1243 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 SIL1Q9H173 461 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 JAG2Q9Y219 1238 aa15.89■□□□□ 0.13
SNORD88B-201ENST00000408454 TCP10L2B9ZVM9 353 aa15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 RFX5P48382 616 aaPredicted RBP15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 MLLT1Q03111 559 aaPredicted RBP15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 DZIP1Q86YF9 867 aaKnown RBP15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 NOL10Q9BSC4 688 aaKnown RBP15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 IQSEC3Q9UPP2 1182 aaPredicted RBP15.88■□□□□ 0.13
SNORD88B-201ENST00000408454 GPR25O00155 361 aa15.87■□□□□ 0.13
SNORD88B-201ENST00000408454 LDHCP07864 332 aa15.87■□□□□ 0.13
SNORD88B-201ENST00000408454 NBPF12Q5TAG4 269 aaPredicted RBP15.87■□□□□ 0.13
SNORD88B-201ENST00000408454 KLHDC4Q8TBB5 520 aa15.87■□□□□ 0.13
SNORD88B-201ENST00000408454 UQCRFS1P1P0C7P4 283 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 MOB2Q70IA6 237 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 ATG9AQ7Z3C6 839 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 IFNL1Q8IU54 200 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 ZIC5Q96T25 663 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 MEIS3Q99687 375 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 ZNF341Q9BYN7 854 aa15.86■□□□□ 0.13
SNORD88B-201ENST00000408454 CETPP11597 493 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 KIF22Q14807 665 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 FBXO46Q6PJ61 603 aaPredicted RBP15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 TMED8Q6PL24 325 aaPredicted RBP15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 ERO1BQ86YB8 467 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 FAM151AQ8WW52 585 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 OPTNQ96CV9 577 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 ZFYVE28Q9HCC9 887 aa15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 SCAF8Q9UPN6 1271 aaKnown RBP15.85■□□□□ 0.13
SNORD88B-201ENST00000408454 PCNTO95613 3336 aa15.84■□□□□ 0.13
SNORD88B-201ENST00000408454 USP2O75604 605 aaPredicted RBP15.84■□□□□ 0.13
SNORD88B-201ENST00000408454 TRIM27P14373 513 aa15.84■□□□□ 0.13
SNORD88B-201ENST00000408454 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
SNORD88B-201ENST00000408454 ZNF296Q8WUU4 475 aaPredicted RBP15.84■□□□□ 0.13
SNORD88B-201ENST00000408454 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 RGS19P49795 217 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 SNAPC2Q13487 334 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 HSP90AB4PQ58FF6 505 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 CCDC158Q5M9N0 1113 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms