RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 SRP68Q9UHB9 627 aaKnown RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 RPAP1Q9BWH6 1393 aaPredicted RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 CALM1P0DP23 149 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 CALM2P0DP24 149 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 CALM3P0DP25 149 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 GRAPQ13588 217 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 CCDC129Q6ZRS4 1044 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 ATG9AQ7Z3C6 839 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 LINC00116Q8NCU8 138 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 GRAPLQ8TC17 118 aaPredicted RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 SEC31BQ9NQW1 1179 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 DISP2A7MBM2 1401 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 TSPY2A6NKD2 308 aa9.65□□□□□ -0.87
NLK-201ENST00000407008 KINO60870 393 aaKnown RBP9.65□□□□□ -0.87
NLK-201ENST00000407008 IARSP41252 1262 aaKnown RBP9.65□□□□□ -0.87
NLK-201ENST00000407008 NT5C2P49902 561 aa9.65□□□□□ -0.87
NLK-201ENST00000407008 CAVIN1Q6NZI2 390 aaKnown RBP9.65□□□□□ -0.87
NLK-201ENST00000407008 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 PCP11498 1178 aaKnown RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 IRX3P78415 501 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 SSRP1Q08945 709 aaKnown RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 KAZALD1Q96I82 304 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 ZNF512BQ96KM6 892 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 RIPOR2Q9Y4F9 1068 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 RGPD2P0DJD1 1756 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 PATL2C9JE40 543 aaKnown RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 HSPD1P10809 573 aaKnown RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 GNAQP50148 359 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 PTH1RQ03431 593 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 TXNRD1Q16881 649 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 DPP8Q6V1X1 898 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 ZSCAN29Q8IWY8 852 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 ORC3Q9UBD5 711 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 SCN11AQ9UI33 1791 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 RGPD5Q99666 1765 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 GOLGA6L19H0YKK7 550 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 NTSR2O95665 410 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 CASP7P55210 303 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 TBC1D9BQ66K14 1250 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 CRACR2BQ8N4Y2 399 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
NLK-201ENST00000407008 CEP131Q9UPN4 1083 aa9.64□□□□□ -0.87
NLK-201ENST00000407008 ADD2P35612 726 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 KCNQ4P56696 695 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 MAPK8IP2Q13387 824 aaPredicted RBP9.63□□□□□ -0.87
NLK-201ENST00000407008 PPP2R5BQ15173 497 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 STK11IPQ8N1F8 1099 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 CCDC47Q96A33 483 aaKnown RBP9.63□□□□□ -0.87
NLK-201ENST00000407008 HDAC9Q9UKV0 1011 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 CCT2P78371 535 aaKnown RBP9.63□□□□□ -0.87
NLK-201ENST00000407008 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 MPNDQ8N594 471 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 MIGA1Q8NAN2 632 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 CTDP1Q9Y5B0 961 aaPredicted RBP9.63□□□□□ -0.87
NLK-201ENST00000407008 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 SLIT2O94813 1529 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 SALL3Q9BXA9 1300 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 BECN2A8MW95 431 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 RAD21O60216 631 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 TPM2P07951 284 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 MSNP26038 577 aaKnown RBP9.63□□□□□ -0.87
NLK-201ENST00000407008 BCAMP50895 628 aa9.63□□□□□ -0.87
NLK-201ENST00000407008 CC2D2BQ6DHV5 1058 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 MICU3Q86XE3 530 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 DRC7Q8IY82 874 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 KAT14Q9H8E8 782 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 ANGEL1Q9UNK9 670 aaKnown RBP9.62□□□□□ -0.87
NLK-201ENST00000407008 ZNF609O15014 1411 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 RTN1Q16799 776 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 KLHL40Q2TBA0 621 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 TCEANC2Q96MN5 208 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 ARMT1Q9H993 441 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 PALD1Q9ULE6 856 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 E7EWF7 191 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 GYG1P46976 350 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 ME1P48163 572 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 IFIT1BQ5T764 474 aaKnown RBP9.62□□□□□ -0.87
NLK-201ENST00000407008 ATL3Q6DD88 541 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 TTC6Q86TZ1 520 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 SDF4Q9BRK5 362 aa9.62□□□□□ -0.87
NLK-201ENST00000407008 F13A1P00488 732 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 NPR1P16066 1061 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 TXLNAP40222 546 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 NAT10Q9H0A0 1025 aaKnown RBP9.61□□□□□ -0.87
NLK-201ENST00000407008 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 PKD1L3Q7Z443 1732 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 ARID4AP29374 1257 aaPredicted RBP9.61□□□□□ -0.87
NLK-201ENST00000407008 KIAA2012Q0VF49 1180 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 SLC10A5Q5PT55 438 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 FERMT3Q86UX7 667 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 CCDC24Q8N4L8 307 aa9.61□□□□□ -0.87
NLK-201ENST00000407008 CCDC12Q8WUD4 166 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms