RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 RIPOR2Q9Y4F9 1068 aa13.02□□□□□ -0.33
RPAIN-204ENST00000405578 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
RPAIN-204ENST00000405578 NF2P35240 595 aa13.01□□□□□ -0.33
RPAIN-204ENST00000405578 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
RPAIN-204ENST00000405578 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
RPAIN-204ENST00000405578 BRCA2P51587 3418 aa13.01□□□□□ -0.33
RPAIN-204ENST00000405578 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 ZNF804BA4D1E1 1349 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 PDE8BO95263 885 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 PRKG1Q13976 671 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 GMLQ99445 158 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 RWDD1Q9H446 243 aaPredicted RBP13□□□□□ -0.33
RPAIN-204ENST00000405578 AKAP2Q9Y2D5 859 aa13□□□□□ -0.33
RPAIN-204ENST00000405578 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
RPAIN-204ENST00000405578 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 TAF5LO75529 589 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
RPAIN-204ENST00000405578 SPRYD7Q5W111 196 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-204ENST00000405578 ARMC5Q96C12 935 aa12.99□□□□□ -0.33
RPAIN-204ENST00000405578 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-204ENST00000405578 DLL1O00548 723 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
RPAIN-204ENST00000405578 ARMC9Q7Z3E5 817 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 CD99L2Q8TCZ2 262 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 LPIN2Q92539 896 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-204ENST00000405578 PTPN22Q9Y2R2 807 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 SZT2Q5T011 3432 aa12.98□□□□□ -0.33
RPAIN-204ENST00000405578 SLC5A1P13866 664 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-204ENST00000405578 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 OTOFQ9HC10 1997 aa12.97□□□□□ -0.33
RPAIN-204ENST00000405578 MYH3P11055 1940 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 USP17L3A6NCW0 530 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 USP17L4A6NCW7 530 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 MANSC4A6NHS7 340 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-204ENST00000405578 SASH1O94885 1247 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 TFCP2Q12800 502 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 ATP2B3Q16720 1220 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 USP17L1Q7RTZ2 530 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 VGLL2Q8N8G2 317 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
RPAIN-204ENST00000405578 FZD1Q9UP38 647 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
RPAIN-204ENST00000405578 MED23Q9ULK4 1368 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 H0YGN5 161 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 APBB1O00213 710 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAIN-204ENST00000405578 WNT10BO00744 389 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 LDLRAD1Q5T700 205 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 GORABQ5T7V8 394 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
RPAIN-204ENST00000405578 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
RPAIN-204ENST00000405578 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 EFCC1Q9HA90 598 aa12.95□□□□□ -0.34
RPAIN-204ENST00000405578 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
RPAIN-204ENST00000405578 CRHR2Q13324 411 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 PODNQ7Z5L7 613 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 WNK4Q96J92 1243 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
RPAIN-204ENST00000405578 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 FRAT2O75474 233 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-204ENST00000405578 FGFR2P21802 821 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 HIBADHP31937 336 aaKnown RBP12.93□□□□□ -0.34
RPAIN-204ENST00000405578 INHBEP58166 350 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 CAP1Q01518 475 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 APOBEC3FQ8IUX4 373 aaKnown RBP12.93□□□□□ -0.34
RPAIN-204ENST00000405578 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 SLC17A8Q8NDX2 589 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 SLC10A4Q96EP9 437 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 ZNF333Q96JL9 665 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 SSC5DA1L4H1 1573 aa12.93□□□□□ -0.34
RPAIN-204ENST00000405578 COL1A1P02452 1464 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-204ENST00000405578 SNAP23O00161 211 aa12.92□□□□□ -0.34
RPAIN-204ENST00000405578 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms