RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 WTIPA6NIX2 430 aaPredicted RBP25.14■■□□□ 1.62
TPM1-208ENST00000404484 RIMBP2O15034 1052 aa25.14■■□□□ 1.62
TPM1-208ENST00000404484 ZKSCAN1P17029 563 aaPredicted RBP25.14■■□□□ 1.62
TPM1-208ENST00000404484 EIF6P56537 245 aaKnown RBP25.14■■□□□ 1.62
TPM1-208ENST00000404484 SLC9C2Q5TAH2 1124 aa25.14■■□□□ 1.62
TPM1-208ENST00000404484 ZNRF3Q9ULT6 936 aa25.14■■□□□ 1.62
TPM1-208ENST00000404484 U3KPZ7 1027 aaPredicted RBP25.14■■□□□ 1.62
TPM1-208ENST00000404484 MAST3O60307 1309 aa25.14■■□□□ 1.61
TPM1-208ENST00000404484 UFL1O94874 794 aa25.14■■□□□ 1.61
TPM1-208ENST00000404484 KCNB2Q92953 911 aa25.14■■□□□ 1.61
TPM1-208ENST00000404484 SEC62Q99442 399 aaKnown RBP25.14■■□□□ 1.61
TPM1-208ENST00000404484 PALD1Q9ULE6 856 aa25.14■■□□□ 1.61
TPM1-208ENST00000404484 IRS2Q9Y4H2 1338 aa25.13■■□□□ 1.61
TPM1-208ENST00000404484 FRAT2O75474 233 aaPredicted RBP25.13■■□□□ 1.61
TPM1-208ENST00000404484 NECTIN1Q15223 517 aa25.13■■□□□ 1.61
TPM1-208ENST00000404484 ZNF804AQ7Z570 1209 aa25.13■■□□□ 1.61
TPM1-208ENST00000404484 DSCC1Q9BVC3 393 aa25.13■■□□□ 1.61
TPM1-208ENST00000404484 PDE6AP16499 860 aa25.12■■□□□ 1.61
TPM1-208ENST00000404484 GPC2Q8N158 579 aa25.12■■□□□ 1.61
TPM1-208ENST00000404484 L3MBTL3Q96JM7 780 aaPredicted RBP25.12■■□□□ 1.61
TPM1-208ENST00000404484 EYA3Q99504 573 aa25.12■■□□□ 1.61
TPM1-208ENST00000404484 LTBP1Q14766 1721 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 IGSF3O75054 1194 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 TOMM70O94826 608 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 CHGBP05060 677 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 KLRK1P26718 216 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 CCDC129Q6ZRS4 1044 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 ERICH6Q7L0X2 663 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 OSBP2Q969R2 916 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 ZC3H12CQ9C0D7 883 aaKnown RBP25.11■■□□□ 1.61
TPM1-208ENST00000404484 SNX14Q9Y5W7 946 aa25.11■■□□□ 1.61
TPM1-208ENST00000404484 MYH13Q9UKX3 1938 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 YDJCA8MPS7 323 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 CXCL9Q07325 125 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 CREB3L3Q68CJ9 461 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 LRP2BPQ9P2M1 347 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 GJA3Q9Y6H8 435 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 M0R2C6 588 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 SLC4A3P48751 1232 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 DOK7Q18PE1 504 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 TMED8Q6PL24 325 aaPredicted RBP25.1■■□□□ 1.61
TPM1-208ENST00000404484 DBNDD1Q9H9R9 158 aa25.1■■□□□ 1.61
TPM1-208ENST00000404484 IQSEC3Q9UPP2 1182 aaPredicted RBP25.1■■□□□ 1.61
TPM1-208ENST00000404484 WDR90Q96KV7 1748 aa25.09■■□□□ 1.61
TPM1-208ENST00000404484 ZNF532Q9HCE3 1301 aa25.09■■□□□ 1.61
TPM1-208ENST00000404484 MCM2P49736 904 aa25.09■■□□□ 1.61
TPM1-208ENST00000404484 COL1A1P02452 1464 aaPredicted RBP25.09■■□□□ 1.61
TPM1-208ENST00000404484 K7ELQ4 463 aaPredicted RBP25.08■■□□□ 1.61
TPM1-208ENST00000404484 SLC27A2O14975 620 aa25.08■■□□□ 1.61
TPM1-208ENST00000404484 ZGPATQ8N5A5 531 aaKnown RBP25.08■■□□□ 1.61
TPM1-208ENST00000404484 TM6SF1Q9BZW5 370 aa25.08■■□□□ 1.61
TPM1-208ENST00000404484 TCRBV5S4A2TA0A5A2 114 aa25.07■■□□□ 1.6
TPM1-208ENST00000404484 RAD17O75943 681 aa25.07■■□□□ 1.6
TPM1-208ENST00000404484 NEK4P51957 841 aa25.07■■□□□ 1.6
TPM1-208ENST00000404484 KRT32Q14532 448 aa25.07■■□□□ 1.6
TPM1-208ENST00000404484 SLFNL1Q499Z3 407 aa25.07■■□□□ 1.6
TPM1-208ENST00000404484 MAGEB6Q8N7X4 407 aa25.07■■□□□ 1.6
TPM1-208ENST00000404484 MYO5AQ9Y4I1 1855 aaKnown RBP25.07■■□□□ 1.6
TPM1-208ENST00000404484 GPAA1O43292 621 aa25.06■■□□□ 1.6
TPM1-208ENST00000404484 HSPD1P10809 573 aaKnown RBP25.06■■□□□ 1.6
TPM1-208ENST00000404484 PSMA5P28066 241 aa25.06■■□□□ 1.6
TPM1-208ENST00000404484 RASEFQ8IZ41 740 aa25.06■■□□□ 1.6
TPM1-208ENST00000404484 PUS7LQ9H0K6 701 aaKnown RBP25.06■■□□□ 1.6
TPM1-208ENST00000404484 KCNQ5Q9NR82 932 aa25.06■■□□□ 1.6
TPM1-208ENST00000404484 ABCF2Q9UG63 623 aa25.06■■□□□ 1.6
TPM1-208ENST00000404484 CTNNA3Q9UI47 895 aa25.06■■□□□ 1.6
TPM1-208ENST00000404484 ECE2O60344 883 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 TSGA10IPQ3SY00 556 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 CIAPIN1Q6FI81 312 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 TXNRD3Q86VQ6 643 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 TDRD7Q8NHU6 1098 aaKnown RBP25.05■■□□□ 1.6
TPM1-208ENST00000404484 IQCA1LA6NCM1 817 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 SPTY2D1Q68D10 685 aaPredicted RBP25.05■■□□□ 1.6
TPM1-208ENST00000404484 RBM46Q8TBY0 533 aaKnown RBP25.05■■□□□ 1.6
TPM1-208ENST00000404484 WDR66Q8TBY9 1149 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 AIDAQ96BJ3 306 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 TAF1DQ9H5J8 278 aaPredicted RBP25.05■■□□□ 1.6
TPM1-208ENST00000404484 RAI14Q9P0K7 980 aa25.05■■□□□ 1.6
TPM1-208ENST00000404484 HACL1Q9UJ83 578 aa25.04■■□□□ 1.6
TPM1-208ENST00000404484 SALL1Q9NSC2 1324 aa25.04■■□□□ 1.6
TPM1-208ENST00000404484 SCNN1DP51172 638 aa25.03■■□□□ 1.6
TPM1-208ENST00000404484 TNIP1Q15025 636 aa25.03■■□□□ 1.6
TPM1-208ENST00000404484 G3V3G9 751 aa25.02■■□□□ 1.6
TPM1-208ENST00000404484 CHAF1AQ13111 956 aaPredicted RBP25.02■■□□□ 1.6
TPM1-208ENST00000404484 DCAF8Q5TAQ9 597 aa25.02■■□□□ 1.6
TPM1-208ENST00000404484 JAKMIP1Q96N16 626 aaKnown RBP25.02■■□□□ 1.6
TPM1-208ENST00000404484 CD2BP2O95400 341 aaKnown RBP25.01■■□□□ 1.59
TPM1-208ENST00000404484 POTEIP0CG38 1075 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 POTEJP0CG39 1038 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 IL1R1P14778 569 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 GNAT2P19087 354 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 EPS15P42566 896 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 VPS53Q5VIR6 699 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 CYP46A1Q9Y6A2 500 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 RPAP1Q9BWH6 1393 aaPredicted RBP25.01■■□□□ 1.59
TPM1-208ENST00000404484 PSMD14O00487 310 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 CASTP20810 708 aaKnown RBP25.01■■□□□ 1.59
TPM1-208ENST00000404484 EPHX2P34913 555 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 UPF3BQ9BZI7 483 aaKnown RBP25.01■■□□□ 1.59
TPM1-208ENST00000404484 ZSWIM6Q9HCJ5 1215 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms