RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
SMC1B-202ENST00000404354 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
SMC1B-202ENST00000404354 HAUS7Q99871 368 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 LLPHQ9BRT6 129 aaKnown RBP11.04□□□□□ -0.64
SMC1B-202ENST00000404354 HSD3B7Q9H2F3 369 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 TNRQ92752 1358 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 STX17P56962 302 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 PPP2R3AQ06190 1150 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 LONRF3Q496Y0 759 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 ALDH8A1Q9H2A2 487 aaPredicted RBP11.03□□□□□ -0.64
SMC1B-202ENST00000404354 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 MAST3O60307 1309 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 ADAMTS13Q76LX8 1427 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 NRXN3Q9Y4C0 1643 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 VWA3AA6NCI4 1184 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 ZRANB2O95218 330 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMC1B-202ENST00000404354 RHOXF2BP0C7M4 288 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 FOXP4Q8IVH2 680 aaPredicted RBP11.03□□□□□ -0.64
SMC1B-202ENST00000404354 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
SMC1B-202ENST00000404354 FBXO18Q8NFZ0 1043 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 RHOXF2Q9BQY4 288 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 PCDHA5Q9Y5H7 936 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 HOXB7P09629 217 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 ZSCAN26Q16670 478 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
SMC1B-202ENST00000404354 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 VPS18Q9P253 973 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 RGPD1P0DJD0 1748 aa11.03□□□□□ -0.64
SMC1B-202ENST00000404354 N4BP1O75113 896 aaKnown RBP11.02□□□□□ -0.64
SMC1B-202ENST00000404354 CASP1P29466 404 aa11.02□□□□□ -0.64
SMC1B-202ENST00000404354 ZNF790Q6PG37 636 aa11.02□□□□□ -0.64
SMC1B-202ENST00000404354 RALYLQ86SE5 291 aaKnown RBP11.02□□□□□ -0.64
SMC1B-202ENST00000404354 CNNM3Q8NE01 707 aa11.02□□□□□ -0.64
SMC1B-202ENST00000404354 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.64
SMC1B-202ENST00000404354 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.64
SMC1B-202ENST00000404354 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.64
SMC1B-202ENST00000404354 ARFGAP3Q9NP61 516 aa11.02□□□□□ -0.64
SMC1B-202ENST00000404354 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.64
SMC1B-202ENST00000404354 AKAP12Q02952 1782 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 NEDD4P46934 1319 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.65
SMC1B-202ENST00000404354 MYL5Q02045 173 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 GRIN1Q05586 938 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
SMC1B-202ENST00000404354 AXDND1Q5T1B0 1012 aaPredicted RBP11.02□□□□□ -0.65
SMC1B-202ENST00000404354 OLFM4Q6UX06 510 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 RSPH14Q9UHP6 348 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 H3BQF6 201 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 FGAP02671 866 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 RFX5P48382 616 aaPredicted RBP11.02□□□□□ -0.65
SMC1B-202ENST00000404354 SHC4Q6S5L8 630 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 METTL22Q9BUU2 404 aaPredicted RBP11.02□□□□□ -0.65
SMC1B-202ENST00000404354 COPRSQ9NQ92 184 aa11.02□□□□□ -0.65
SMC1B-202ENST00000404354 ADORA1P30542 326 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 FOXR1Q6PIV2 292 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 SOWAHDA6NJG2 315 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 PDE11AQ9HCR9 933 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 SAMSN1Q9NSI8 373 aaKnown RBP11.01□□□□□ -0.65
SMC1B-202ENST00000404354 INTS13Q9NVM9 706 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 SPATA31D1Q6ZQQ2 1576 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 PXDNQ92626 1479 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 A0A1B0GUL7 405 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 RABEP2Q9H5N1 569 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 TOMM22Q9NS69 142 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 ADAM21Q9UKJ8 722 aa11.01□□□□□ -0.65
SMC1B-202ENST00000404354 BMP6P22004 513 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
SMC1B-202ENST00000404354 SCARF1Q14162 830 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 STAMQ92783 540 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
SMC1B-202ENST00000404354 MRPL44Q9H9J2 332 aaKnown RBP11□□□□□ -0.65
SMC1B-202ENST00000404354 NFE2L3Q9Y4A8 694 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 SETD1AO15047 1707 aaKnown RBP11□□□□□ -0.65
SMC1B-202ENST00000404354 EFCAB8A8MWE9 144 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 FMR1Q06787 632 aaKnown RBP eCLIP11□□□□□ -0.65
SMC1B-202ENST00000404354 NFXL1Q6ZNB6 911 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 ORAI2Q96SN7 254 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 TECPR2O15040 1411 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
SMC1B-202ENST00000404354 A0A1W2PQ27 194 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 A0A1W2PQ64 194 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 A0A1W2PQD8 194 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 RNF113AO15541 343 aaKnown RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 ZSCAN12O43309 604 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 ABL1P00519 1130 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 GCP02774 474 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 LONRF2Q1L5Z9 754 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 METTL16Q86W50 562 aaKnown RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 VSTM4Q8IW00 320 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 TTC5Q8N0Z6 440 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms