RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 DPF2Q92785 391 aa14.91□□□□□ -0.02
LINC00339-201ENST00000404210 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
LINC00339-201ENST00000404210 MXD3Q9BW11 206 aa14.91□□□□□ -0.02
LINC00339-201ENST00000404210 RAI14Q9P0K7 980 aa14.91□□□□□ -0.02
LINC00339-201ENST00000404210 AK9Q5TCS8 1911 aa14.91□□□□□ -0.02
LINC00339-201ENST00000404210 DOCK2Q92608 1830 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 HIP1O00291 1037 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 LDHCP07864 332 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 ZFYP08048 801 aaPredicted RBP14.9□□□□□ -0.02
LINC00339-201ENST00000404210 PRDX5P30044 214 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 HDLBPQ00341 1268 aaKnown RBP14.9□□□□□ -0.02
LINC00339-201ENST00000404210 GRIK5Q16478 980 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
LINC00339-201ENST00000404210 MAST3O60307 1309 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 ZNF541Q9H0D2 1346 aa14.9□□□□□ -0.02
LINC00339-201ENST00000404210 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
LINC00339-201ENST00000404210 ADD2P35612 726 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 GSTO1P78417 241 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 MECOMQ03112 1051 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 UBE3CQ15386 1083 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 SLC9C2Q5TAH2 1124 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 FAM163AQ96GL9 167 aaPredicted RBP14.89□□□□□ -0.03
LINC00339-201ENST00000404210 TTF2Q9UNY4 1162 aaKnown RBP14.89□□□□□ -0.03
LINC00339-201ENST00000404210 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
LINC00339-201ENST00000404210 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
LINC00339-201ENST00000404210 MYH7P12883 1935 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 RFX7Q2KHR2 1363 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 GLTPD2A6NH11 291 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 NAA16Q6N069 864 aaPredicted RBP14.88□□□□□ -0.03
LINC00339-201ENST00000404210 HHIPL2Q6UWX4 724 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 DZIP1Q86YF9 867 aaKnown RBP14.88□□□□□ -0.03
LINC00339-201ENST00000404210 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 HDAC9Q9UKV0 1011 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 TIAM2Q8IVF5 1701 aa14.88□□□□□ -0.03
LINC00339-201ENST00000404210 TCRBV5S4A2TA0A5A2 114 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 F8W031 263 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-201ENST00000404210 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-201ENST00000404210 USP17L8P0C7I0 530 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 PDE6AP16499 860 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 CHMLP26374 656 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 ZNF384Q8TF68 577 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 ZNF532Q9HCE3 1301 aa14.87□□□□□ -0.03
LINC00339-201ENST00000404210 CYP7A1P22680 504 aa14.86□□□□□ -0.03
LINC00339-201ENST00000404210 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
LINC00339-201ENST00000404210 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
LINC00339-201ENST00000404210 APPBP2Q92624 585 aa14.86□□□□□ -0.03
LINC00339-201ENST00000404210 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
LINC00339-201ENST00000404210 CNOT7Q9UIV1 285 aaKnown RBP14.86□□□□□ -0.03
LINC00339-201ENST00000404210 SERPINA10Q9UK55 444 aa14.86□□□□□ -0.03
LINC00339-201ENST00000404210 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
LINC00339-201ENST00000404210 H7C1D1 291 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 CDC45O75419 566 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 SCNN1DP51172 638 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 ZNF280AP59817 542 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-201ENST00000404210 MTMR14Q8NCE2 650 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-201ENST00000404210 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 GAKO14976 1311 aa14.85□□□□□ -0.03
LINC00339-201ENST00000404210 GPR75-ASB3A0A0A6YYF3 556 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 CRKP46108 304 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 PPP4CP60510 307 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 NMIQ13287 307 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-201ENST00000404210 DIXDC1Q155Q3 683 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 MCMDC2Q4G0Z9 681 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 CASC1Q6TDU7 716 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 CERS3Q8IU89 383 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 GPRC5DQ9NZD1 345 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
LINC00339-201ENST00000404210 BAG3O95817 575 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 CHGBP05060 677 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 CFAP100Q494V2 611 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 SLFNL1Q499Z3 407 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 CWC27Q6UX04 472 aaKnown RBP14.83□□□□□ -0.04
LINC00339-201ENST00000404210 MICALL2Q8IY33 904 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 OSBP2Q969R2 916 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 NOL10Q9BSC4 688 aaKnown RBP14.83□□□□□ -0.04
LINC00339-201ENST00000404210 PUS7LQ9H0K6 701 aaKnown RBP14.83□□□□□ -0.04
LINC00339-201ENST00000404210 DAGLAQ9Y4D2 1042 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 MAST2Q6P0Q8 1798 aa14.83□□□□□ -0.04
LINC00339-201ENST00000404210 MAGEB6P1A0A0J9YX57 407 aa14.82□□□□□ -0.04
LINC00339-201ENST00000404210 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-201ENST00000404210 RBM5P52756 815 aaKnown RBP eCLIP14.82□□□□□ -0.04
LINC00339-201ENST00000404210 DLGAP5Q15398 846 aa14.82□□□□□ -0.04
LINC00339-201ENST00000404210 APOBEC3HQ6NTF7 200 aaKnown RBP14.82□□□□□ -0.04
LINC00339-201ENST00000404210 ADGRA1Q86SQ6 560 aa14.82□□□□□ -0.04
LINC00339-201ENST00000404210 ZBED3Q96IU2 234 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-201ENST00000404210 FAM227BQ96M60 508 aa14.82□□□□□ -0.04
LINC00339-201ENST00000404210 SEC62Q99442 399 aaKnown RBP14.82□□□□□ -0.04
LINC00339-201ENST00000404210 MYOZ2Q9NPC6 264 aa14.82□□□□□ -0.04
LINC00339-201ENST00000404210 SRCAPQ6ZRS2 3230 aa14.81□□□□□ -0.04
LINC00339-201ENST00000404210 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
LINC00339-201ENST00000404210 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
LINC00339-201ENST00000404210 PLCG2P16885 1265 aa14.81□□□□□ -0.04
LINC00339-201ENST00000404210 EPS15P42566 896 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms