RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 MINPP1Q9UNW1 487 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 SSC5DA1L4H1 1573 aa12.05□□□□□ -0.48
NUP43-204ENST00000403890 MYO1BO43795 1136 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 PCCAP05165 728 aaPredicted RBP12.04□□□□□ -0.48
NUP43-204ENST00000403890 GJA8P48165 433 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 GTF2A2P52657 109 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 RIPK4P57078 832 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 GTF2IP78347 998 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
NUP43-204ENST00000403890 MTFR1Q15390 333 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 UBE2Q1Q7Z7E8 422 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 TXNRD3Q86VQ6 643 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 MTMR14Q8NCE2 650 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 ELP3Q9H9T3 547 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 ZNF804BA4D1E1 1349 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
NUP43-204ENST00000403890 LAMB1P07942 1786 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 CCL15-CCL14A0A0B4J2E2 113 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 GJB1P08034 283 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 TRIM26Q12899 539 aaPredicted RBP12.03□□□□□ -0.48
NUP43-204ENST00000403890 CCL15Q16663 113 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 CCDC191Q8NCU4 936 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 ARHGAP39Q9C0H5 1083 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 LEMD3Q9Y2U8 911 aa12.03□□□□□ -0.48
NUP43-204ENST00000403890 CLRN2A0PK11 232 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 CHL1O00533 1208 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 TLR2O60603 784 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 HOXB7P09629 217 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 RASA3Q14644 834 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 GPR153Q6NV75 609 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.49
NUP43-204ENST00000403890 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 VEZTQ9HBM0 779 aa12.02□□□□□ -0.49
NUP43-204ENST00000403890 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 EVI5O60447 810 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 GRK4P32298 578 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 LMOD3Q0VAK6 560 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 ZNF710Q8N1W2 664 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 DEFB123Q8N688 67 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 PRMT6Q96LA8 375 aaPredicted RBP12.01□□□□□ -0.49
NUP43-204ENST00000403890 COL25A1Q9BXS0 654 aaPredicted RBP12.01□□□□□ -0.49
NUP43-204ENST00000403890 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
NUP43-204ENST00000403890 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 STXBP5LQ9Y2K9 1186 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 PCDHAC2Q9Y5I4 1007 aa12.01□□□□□ -0.49
NUP43-204ENST00000403890 CCL5P13501 91 aa12□□□□□ -0.49
NUP43-204ENST00000403890 HOXD10P28358 340 aa12□□□□□ -0.49
NUP43-204ENST00000403890 CTSWP56202 376 aa12□□□□□ -0.49
NUP43-204ENST00000403890 CFAP100Q494V2 611 aa12□□□□□ -0.49
NUP43-204ENST00000403890 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
NUP43-204ENST00000403890 HELBQ8NG08 1087 aaPredicted RBP12□□□□□ -0.49
NUP43-204ENST00000403890 MYD88Q99836 296 aa12□□□□□ -0.49
NUP43-204ENST00000403890 RNF208Q9H0X6 261 aa12□□□□□ -0.49
NUP43-204ENST00000403890 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
NUP43-204ENST00000403890 SRRDQ9UH36 339 aa12□□□□□ -0.49
NUP43-204ENST00000403890 FARP2O94887 1054 aaPredicted RBP11.99□□□□□ -0.49
NUP43-204ENST00000403890 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 CERS5Q8N5B7 392 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 TTLL11Q8NHH1 800 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 RAET1EQ8TD07 263 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 TRIM47Q96LD4 638 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 CD209Q9NNX6 404 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 BIN2Q9UBW5 565 aaPredicted RBP11.99□□□□□ -0.49
NUP43-204ENST00000403890 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
NUP43-204ENST00000403890 CSADQ9Y600 493 aa11.99□□□□□ -0.49
NUP43-204ENST00000403890 ZNF646O15015 1829 aaPredicted RBP11.99□□□□□ -0.49
NUP43-204ENST00000403890 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
NUP43-204ENST00000403890 CETPP11597 493 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 KLRK1P26718 216 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
NUP43-204ENST00000403890 PSMC4P43686 418 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 TNFAIP1Q13829 316 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 VGLL4Q14135 290 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
NUP43-204ENST00000403890 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 GREM2Q9H772 168 aa11.98□□□□□ -0.49
NUP43-204ENST00000403890 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
NUP43-204ENST00000403890 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
NUP43-204ENST00000403890 BMP8BP34820 402 aa11.97□□□□□ -0.49
NUP43-204ENST00000403890 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
NUP43-204ENST00000403890 RBM5P52756 815 aaKnown RBP eCLIP11.97□□□□□ -0.49
NUP43-204ENST00000403890 UBXN2AP68543 259 aa11.97□□□□□ -0.49
NUP43-204ENST00000403890 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
NUP43-204ENST00000403890 Q7L0L9 218 aa11.97□□□□□ -0.49
NUP43-204ENST00000403890 PHAXQ9H814 394 aaKnown RBP11.97□□□□□ -0.49
NUP43-204ENST00000403890 MTMR10Q9NXD2 777 aa11.97□□□□□ -0.49
NUP43-204ENST00000403890 AOX1Q06278 1338 aa11.96□□□□□ -0.49
NUP43-204ENST00000403890 FMNL1O95466 1100 aaPredicted RBP11.96□□□□□ -0.49
NUP43-204ENST00000403890 SGPL1O95470 568 aa11.96□□□□□ -0.49
NUP43-204ENST00000403890 CAPN2P17655 700 aa11.96□□□□□ -0.49
NUP43-204ENST00000403890 OSBPP22059 807 aa11.96□□□□□ -0.49
NUP43-204ENST00000403890 KCNJ4P48050 445 aa11.96□□□□□ -0.49
NUP43-204ENST00000403890 C17orf99Q6UX52 265 aa11.96□□□□□ -0.49
NUP43-204ENST00000403890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUP43-204ENST00000403890 UNC80Q8N2C7 3258 aa11.95□□□□□ -0.5
NUP43-204ENST00000403890 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms