RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NFXL1Q6ZNB6 911 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 ALG1Q9BT22 464 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 FOXN1O15353 648 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 CYB5R4Q7L1T6 521 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 NCOA7Q8NI08 942 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 PPP1R13BQ96KQ4 1090 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 MRC1P22897 1456 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 TMEM232C9JQI7 657 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 KIF23Q02241 960 aaPredicted RBP13.88□□□□□ -0.19
RBM39-206ENST00000403542 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
RBM39-206ENST00000403542 TBC1D10CQ8IV04 446 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 MB21D2Q8IYB1 491 aaPredicted RBP13.88□□□□□ -0.19
RBM39-206ENST00000403542 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 ZKSCAN3Q9BRR0 538 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 OGFRQ9NZT2 677 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
RBM39-206ENST00000403542 NEDD4P46934 1319 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 CDC27P30260 824 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 SYKP43405 635 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 TRDNQ13061 729 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 VPS37DQ86XT2 251 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 DNAI1Q9UI46 699 aa13.88□□□□□ -0.19
RBM39-206ENST00000403542 AFDNP55196 1824 aaKnown RBP13.87□□□□□ -0.19
RBM39-206ENST00000403542 MCAMP43121 646 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
RBM39-206ENST00000403542 FANCCQ00597 558 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 AXDND1Q5T1B0 1012 aaPredicted RBP13.87□□□□□ -0.19
RBM39-206ENST00000403542 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 ERICH4A6NGS2 130 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 PDILTQ8N807 584 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 PRDM11Q9NQV5 511 aa13.87□□□□□ -0.19
RBM39-206ENST00000403542 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
RBM39-206ENST00000403542 NEMFO60524 1076 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 IFIT5Q13325 482 aaKnown RBP13.86□□□□□ -0.19
RBM39-206ENST00000403542 NCAPHQ15003 741 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
RBM39-206ENST00000403542 UTP14AQ9BVJ6 771 aaKnown RBP13.86□□□□□ -0.19
RBM39-206ENST00000403542 NBPF3Q9H094 633 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 CNNM1Q9NRU3 951 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 DDX41Q9UJV9 622 aaKnown RBP13.86□□□□□ -0.19
RBM39-206ENST00000403542 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 SLU7O95391 586 aaKnown RBP13.86□□□□□ -0.19
RBM39-206ENST00000403542 UBASH3AP57075 661 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 KRT40Q6A162 431 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 GRAMD1CQ8IYS0 662 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 GREM2Q9H772 168 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
RBM39-206ENST00000403542 NLRP12P59046 1061 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 SHC4Q6S5L8 630 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 APPBP2Q92624 585 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 FEZ1Q99689 392 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 RFX7Q2KHR2 1363 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 A0A1W2PQ27 194 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 A0A1W2PQ64 194 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 A0A1W2PQD8 194 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 GSDMDP57764 484 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 GRIN1Q05586 938 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 LONRF3Q496Y0 759 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
RBM39-206ENST00000403542 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 FANCLQ9NW38 375 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 KCNJ14Q9UNX9 436 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 USP54Q70EL1 1684 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 UTP14CQ5TAP6 766 aaKnown RBP13.85□□□□□ -0.19
RBM39-206ENST00000403542 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
RBM39-206ENST00000403542 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
RBM39-206ENST00000403542 WWC3Q9ULE0 1092 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 ASAP1Q9ULH1 1129 aa13.85□□□□□ -0.19
RBM39-206ENST00000403542 SLIT3O75094 1523 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 YEATS4O95619 227 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 HLFQ16534 295 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
RBM39-206ENST00000403542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.192e-26■■■□□ 15.2
RBM39-206ENST00000403542 SIPA1L3O60292 1781 aaPredicted RBP13.84□□□□□ -0.19
RBM39-206ENST00000403542 URI1O94763 535 aaPredicted RBP13.84□□□□□ -0.19
RBM39-206ENST00000403542 ITGA6P23229 1130 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 GUCY1A2P33402 732 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 TPM4P67936 248 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 ATL3Q6DD88 541 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 GPR108Q9NPR9 543 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 ZNF446Q9NWS9 450 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 ANGEL1Q9UNK9 670 aaKnown RBP13.84□□□□□ -0.19
RBM39-206ENST00000403542 ZNF532Q9HCE3 1301 aa13.84□□□□□ -0.19
RBM39-206ENST00000403542 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 PHKA1P46020 1223 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 PDE4BQ07343 736 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 ARHGAP29Q52LW3 1261 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
RBM39-206ENST00000403542 OSBPL5Q9H0X9 879 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms