RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 TDRD3Q9H7E2 651 aaKnown RBP15.54■□□□□ 0.08
PRAME-204ENST00000403441 ELP3Q9H9T3 547 aa15.54■□□□□ 0.08
PRAME-204ENST00000403441 E9PSI1 815 aa15.53■□□□□ 0.08
PRAME-204ENST00000403441 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
PRAME-204ENST00000403441 GJA5P36382 358 aa15.53■□□□□ 0.08
PRAME-204ENST00000403441 CRKP46108 304 aa15.53■□□□□ 0.08
PRAME-204ENST00000403441 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
PRAME-204ENST00000403441 SUCLG2Q96I99 432 aa15.53■□□□□ 0.08
PRAME-204ENST00000403441 CSADQ9Y600 493 aa15.53■□□□□ 0.08
PRAME-204ENST00000403441 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
PRAME-204ENST00000403441 TCP10L2B9ZVM9 353 aa15.52■□□□□ 0.08
PRAME-204ENST00000403441 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.08
PRAME-204ENST00000403441 TBC1D22AQ8WUA7 517 aa15.52■□□□□ 0.08
PRAME-204ENST00000403441 PUS3Q9BZE2 481 aaKnown RBP15.52■□□□□ 0.08
PRAME-204ENST00000403441 EFCC1Q9HA90 598 aa15.52■□□□□ 0.08
PRAME-204ENST00000403441 PTPN22Q9Y2R2 807 aa15.52■□□□□ 0.08
PRAME-204ENST00000403441 UTYO14607 1347 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 NBPF7P0C2Y1 421 aaPredicted RBP15.51■□□□□ 0.07
PRAME-204ENST00000403441 SP3Q02447 781 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 CHAF1AQ13111 956 aaPredicted RBP15.51■□□□□ 0.07
PRAME-204ENST00000403441 VGLL4Q14135 290 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 METTL24Q5JXM2 366 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 KAZALD1Q96I82 304 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 TEPSINQ96N21 525 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 PTPN18Q99952 460 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 TMEM39BQ9GZU3 492 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
PRAME-204ENST00000403441 RIPOR2Q9Y4F9 1068 aa15.51■□□□□ 0.07
PRAME-204ENST00000403441 WDHD1O75717 1129 aaPredicted RBP15.5■□□□□ 0.07
PRAME-204ENST00000403441 GTF2A2P52657 109 aa15.5■□□□□ 0.07
PRAME-204ENST00000403441 HDLBPQ00341 1268 aaKnown RBP15.5■□□□□ 0.07
PRAME-204ENST00000403441 ARHGEF6Q15052 776 aa15.5■□□□□ 0.07
PRAME-204ENST00000403441 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.5■□□□□ 0.07
PRAME-204ENST00000403441 TEKT1Q969V4 418 aa15.5■□□□□ 0.07
PRAME-204ENST00000403441 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
PRAME-204ENST00000403441 TMOD2Q9NZR1 351 aa15.5■□□□□ 0.07
PRAME-204ENST00000403441 IQSEC3Q9UPP2 1182 aaPredicted RBP15.5■□□□□ 0.07
PRAME-204ENST00000403441 MAST3O60307 1309 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 CCL15-CCL14A0A0B4J2E2 113 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 MAP3K9P80192 1104 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 TAF1CQ15572 869 aaPredicted RBP15.49■□□□□ 0.07
PRAME-204ENST00000403441 CCL15Q16663 113 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 RABL6Q3YEC7 729 aaPredicted RBP15.49■□□□□ 0.07
PRAME-204ENST00000403441 FBXO33Q7Z6M2 555 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 CDAN1Q8IWY9 1227 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.49■□□□□ 0.07
PRAME-204ENST00000403441 BRI3BPQ8WY22 251 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 HOOK2Q96ED9 719 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 OTUD5Q96G74 571 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 MS4A4AQ96JQ5 239 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 ZFYVE28Q9HCC9 887 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
PRAME-204ENST00000403441 CENPFP49454 3210 aa15.49■□□□□ 0.07
PRAME-204ENST00000403441 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
PRAME-204ENST00000403441 PDE8BO95263 885 aa15.48■□□□□ 0.07
PRAME-204ENST00000403441 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
PRAME-204ENST00000403441 ARMC5Q96C12 935 aa15.48■□□□□ 0.07
PRAME-204ENST00000403441 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
PRAME-204ENST00000403441 PTPRCP08575 1304 aa15.47■□□□□ 0.07
PRAME-204ENST00000403441 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
PRAME-204ENST00000403441 LRRC24Q50LG9 513 aa15.47■□□□□ 0.07
PRAME-204ENST00000403441 ANKRD44Q8N8A2 993 aa15.47■□□□□ 0.07
PRAME-204ENST00000403441 ZDHHC15Q96MV8 337 aa15.47■□□□□ 0.07
PRAME-204ENST00000403441 KIF16BQ96L93 1317 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 SPDYE5A6NIY4 337 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 IFIT1P09914 478 aaKnown RBP15.46■□□□□ 0.07
PRAME-204ENST00000403441 CETPP11597 493 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 CACNB3P54284 484 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 GRIK5Q16478 980 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 VGLL2Q8N8G2 317 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 WRNIP1Q96S55 665 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 TMEM106CQ9BVX2 250 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 SUGT1Q9Y2Z0 365 aa15.46■□□□□ 0.07
PRAME-204ENST00000403441 MKI67P46013 3256 aaKnown RBP15.46■□□□□ 0.07
PRAME-204ENST00000403441 KIAA0100Q14667 2235 aaKnown RBP15.45■□□□□ 0.06
PRAME-204ENST00000403441 CT47B1P0C2W7 299 aaPredicted RBP15.45■□□□□ 0.06
PRAME-204ENST00000403441 BCAMP50895 628 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 SLC9C1Q4G0N8 1177 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 FKBP1CQ5VVH2 108 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 DCAF15Q66K64 600 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 NBPF11Q86T75 865 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 ERO1BQ86YB8 467 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 MRIQ9BWK5 157 aa15.45■□□□□ 0.06
PRAME-204ENST00000403441 ZCCHC17Q9NP64 241 aaKnown RBP15.45■□□□□ 0.06
PRAME-204ENST00000403441 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
PRAME-204ENST00000403441 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
PRAME-204ENST00000403441 KIF22Q14807 665 aa15.44■□□□□ 0.06
PRAME-204ENST00000403441 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
PRAME-204ENST00000403441 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
PRAME-204ENST00000403441 ZNF333Q96JL9 665 aa15.44■□□□□ 0.06
PRAME-204ENST00000403441 SNCAIPQ9Y6H5 919 aa15.44■□□□□ 0.06
PRAME-204ENST00000403441 SLC5A1P13866 664 aa15.43■□□□□ 0.06
PRAME-204ENST00000403441 ALDH1L2Q3SY69 923 aa15.43■□□□□ 0.06
PRAME-204ENST00000403441 HHIPL2Q6UWX4 724 aa15.43■□□□□ 0.06
PRAME-204ENST00000403441 PTCH2Q9Y6C5 1203 aa15.43■□□□□ 0.06
PRAME-204ENST00000403441 BRCA2P51587 3418 aa15.43■□□□□ 0.06
PRAME-204ENST00000403441 TLR2O60603 784 aa15.42■□□□□ 0.06
PRAME-204ENST00000403441 EN2P19622 333 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms