RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RBM5P52756 815 aaKnown RBP eCLIP15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 FLIIQ13045 1269 aa15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 MTFR1Q15390 333 aa15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TDRD7Q8NHU6 1098 aaKnown RBP15.23■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TCP10L2B9ZVM9 353 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 MYO1BO43795 1136 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 MAP3K9P80192 1104 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 CALD1Q05682 793 aaKnown RBP15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 ZNF804AQ7Z570 1209 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 PRO3102Q9H379 93 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 RBM27Q9P2N5 1060 aaKnown RBP15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 SNCAIPQ9Y6H5 919 aa15.22■□□□□ 0.03
SPTLC1P3-201ENST00000403408 BTBD19C9JJ37 291 aa15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 PLIN1O60240 522 aa15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 GYG1P46976 350 aa15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 CACNB3P54284 484 aa15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TWISTNBQ3B726 338 aaPredicted RBP15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 UBE2Q1Q7Z7E8 422 aa15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 STK31Q9BXU1 1019 aa15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.03
SPTLC1P3-201ENST00000403408 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.02
SPTLC1P3-201ENST00000403408 TLR2O60603 784 aa15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 GTF2A2P52657 109 aa15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 MFSD14BQ5SR56 506 aa15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 FAM84BQ96KN1 310 aaPredicted RBP15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 PUS3Q9BZE2 481 aaKnown RBP15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 PRKRIP1Q9H875 184 aaPredicted RBP15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 SERPINA10Q9UK55 444 aa15.2■□□□□ 0.02
SPTLC1P3-201ENST00000403408 SPDYE5A6NIY4 337 aa15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 F6X3S4 739 aa15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CRKP46108 304 aa15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 IFIT5Q13325 482 aaKnown RBP15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CCDC184Q52MB2 194 aa15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 LAMA2P24043 3122 aaKnown RBP15.19■□□□□ 0.02
SPTLC1P3-201ENST00000403408 IRF6O14896 467 aa15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 FKBP5Q13451 457 aaPredicted RBP15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 C17orf99Q6UX52 265 aa15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 TRIM47Q96LD4 638 aa15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 MYH16Q9H6N6 1097 aa15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
SPTLC1P3-201ENST00000403408 ADGRA2Q96PE1 1338 aa15.17■□□□□ 0.02
SPTLC1P3-201ENST00000403408 MOGSQ13724 837 aa15.17■□□□□ 0.02
SPTLC1P3-201ENST00000403408 TNFAIP1Q13829 316 aa15.17■□□□□ 0.02
SPTLC1P3-201ENST00000403408 KAZALD1Q96I82 304 aa15.17■□□□□ 0.02
SPTLC1P3-201ENST00000403408 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
SPTLC1P3-201ENST00000403408 LDHAL6AQ6ZMR3 332 aa15.16■□□□□ 0.02
SPTLC1P3-201ENST00000403408 WWC1Q8IX03 1113 aa15.16■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CHMP4AQ9BY43 222 aa15.16■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CPA4Q9UI42 421 aa15.16■□□□□ 0.02
SPTLC1P3-201ENST00000403408 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 VAMP4O75379 141 aa15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 HIBADHP31937 336 aaKnown RBP15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 FBXO33Q7Z6M2 555 aa15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 ERO1BQ86YB8 467 aa15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 WRNIP1Q96S55 665 aa15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 CSADQ9Y600 493 aa15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 VCANP13611 3396 aa15.15■□□□□ 0.02
SPTLC1P3-201ENST00000403408 DOCK3Q8IZD9 2030 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 CETPP11597 493 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 OSBPP22059 807 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 INPP5BP32019 993 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ARHGEF6Q15052 776 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 DPF3Q92784 378 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 CNNM1Q9NRU3 951 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 RIPOR2Q9Y4F9 1068 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
SPTLC1P3-201ENST00000403408 PSMC4P43686 418 aa15.13■□□□□ 0.01
SPTLC1P3-201ENST00000403408 PPIL2Q13356 520 aa15.13■□□□□ 0.01
SPTLC1P3-201ENST00000403408 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
SPTLC1P3-201ENST00000403408 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ALPK3Q96L96 1907 aa15.13■□□□□ 0.01
SPTLC1P3-201ENST00000403408 CCL5P13501 91 aa15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GJA8P48165 433 aa15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 SNAPC2Q13487 334 aa15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 MIGA2Q7L4E1 593 aa15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GRM8O00222 908 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GJB1P08034 283 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GRK4P32298 578 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms