RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PDIA3P30101 505 aaKnown RBP23.11■■□□□ 1.29
CCDC47-202ENST00000403162 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
CCDC47-202ENST00000403162 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
CCDC47-202ENST00000403162 CEP57L1Q8IYX8 460 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 KCND1Q9NSA2 647 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 TBC1D2BQ9UPU7 963 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 FOXO4P98177 505 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 SLC27A3Q5K4L6 730 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
CCDC47-202ENST00000403162 NYAP1Q6ZVC0 841 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 ATG9AQ7Z3C6 839 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 FSIP1Q8NA03 581 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 CGNQ9P2M7 1197 aaKnown RBP23.11■■□□□ 1.29
CCDC47-202ENST00000403162 CARMIL3Q8ND23 1372 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 MAP3K15Q6ZN16 1313 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 SPDYE4A6NLX3 237 aa23.1■■□□□ 1.29
CCDC47-202ENST00000403162 HSPD1P10809 573 aaKnown RBP23.1■■□□□ 1.29
CCDC47-202ENST00000403162 FOSBP53539 338 aa23.1■■□□□ 1.29
CCDC47-202ENST00000403162 SKILP12757 684 aa23.1■■□□□ 1.29
CCDC47-202ENST00000403162 ME1P48163 572 aa23.1■■□□□ 1.29
CCDC47-202ENST00000403162 NAT10Q9H0A0 1025 aaKnown RBP23.1■■□□□ 1.29
CCDC47-202ENST00000403162 NCOA5Q9HCD5 579 aaKnown RBP23.1■■□□□ 1.29
CCDC47-202ENST00000403162 RTEL1Q9NZ71 1219 aa23.1■■□□□ 1.29
CCDC47-202ENST00000403162 H7C1W4 665 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 EVCP57679 992 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 CCZ1BP86790 482 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 CCZ1P86791 482 aaPredicted RBP23.09■■□□□ 1.29
CCDC47-202ENST00000403162 ARID5BQ14865 1188 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 TXNRD1Q16881 649 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 FMR1NBQ8N0W7 255 aaPredicted RBP23.09■■□□□ 1.29
CCDC47-202ENST00000403162 MRPS27Q92552 414 aaKnown RBP23.09■■□□□ 1.29
CCDC47-202ENST00000403162 OGFRQ9NZT2 677 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 CTNNA3Q9UI47 895 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
CCDC47-202ENST00000403162 A0A1W2PQ27 194 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 A0A1W2PQ64 194 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 A0A1W2PQD8 194 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 PLSCR1O15162 318 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 GNPATO15228 680 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 CCDC69A6NI79 296 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 ADALQ6DHV7 355 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 NEUROD6Q96NK8 337 aa23.08■■□□□ 1.29
CCDC47-202ENST00000403162 MAST3O60307 1309 aa23.08■■□□□ 1.28
CCDC47-202ENST00000403162 USP27XA6NNY8 438 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 IL15P40933 162 aaPredicted RBP23.07■■□□□ 1.28
CCDC47-202ENST00000403162 GSDMDP57764 484 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 PTPN14Q15678 1187 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 SLFNL1Q499Z3 407 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 PCDHA7Q9UN72 937 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 RNF113AO15541 343 aaKnown RBP23.07■■□□□ 1.28
CCDC47-202ENST00000403162 PROM2Q8N271 834 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 AOPEPQ8N6M6 819 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 AK7Q96M32 723 aa23.07■■□□□ 1.28
CCDC47-202ENST00000403162 RPS6KA4O75676 772 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 HLFQ16534 295 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 SMIM5Q71RC9 77 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 OSBPL5Q9H0X9 879 aaPredicted RBP23.06■■□□□ 1.28
CCDC47-202ENST00000403162 C4BP0C0L5 1744 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 TNS1Q9HBL0 1735 aaKnown RBP23.06■■□□□ 1.28
CCDC47-202ENST00000403162 A0A0G2JLW4 131 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 FDPSP14324 419 aaKnown RBP23.06■■□□□ 1.28
CCDC47-202ENST00000403162 TCIRG1Q13488 830 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 GIGYF2Q6Y7W6 1299 aaKnown RBP23.06■■□□□ 1.28
CCDC47-202ENST00000403162 BPIFA3Q9BQP9 254 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 IMPACTQ9P2X3 320 aa23.06■■□□□ 1.28
CCDC47-202ENST00000403162 RTCBQ9Y3I0 505 aaKnown RBP23.06■■□□□ 1.28
CCDC47-202ENST00000403162 ERVV-1B6SEH8 477 aa23.05■■□□□ 1.28
CCDC47-202ENST00000403162 GUCY1B3Q02153 619 aa23.05■■□□□ 1.28
CCDC47-202ENST00000403162 FILIP1Q7Z7B0 1213 aa23.05■■□□□ 1.28
CCDC47-202ENST00000403162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCDC47-202ENST00000403162 TIMM10P62072 90 aa23.04■■□□□ 1.28
CCDC47-202ENST00000403162 CCAR2Q8N163 923 aaKnown RBP23.04■■□□□ 1.28
CCDC47-202ENST00000403162 NAP1L2Q9ULW6 460 aaPredicted RBP23.04■■□□□ 1.28
CCDC47-202ENST00000403162 A0A087WWV3 80 aa23.04■■□□□ 1.28
CCDC47-202ENST00000403162 IFIT1P09914 478 aaKnown RBP23.04■■□□□ 1.28
CCDC47-202ENST00000403162 LINC00301Q8NCQ3 95 aa23.04■■□□□ 1.28
CCDC47-202ENST00000403162 ZNF592Q92610 1267 aa23.04■■□□□ 1.28
CCDC47-202ENST00000403162 KCNG4Q8TDN1 519 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 DDX60Q8IY21 1712 aaKnown RBP23.03■■□□□ 1.28
CCDC47-202ENST00000403162 KIF2AO00139 706 aaPredicted RBP23.03■■□□□ 1.28
CCDC47-202ENST00000403162 CAMTA2O94983 1202 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 KIF20AO95235 890 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 YEATS4O95619 227 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 NAA30Q147X3 362 aaPredicted RBP23.03■■□□□ 1.28
CCDC47-202ENST00000403162 NBPF11Q86T75 865 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 SDF4Q9BRK5 362 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 POLR3EQ9NVU0 708 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 CWC25Q9NXE8 425 aaPredicted RBP23.03■■□□□ 1.28
CCDC47-202ENST00000403162 KIAA1468Q9P260 1216 aa23.03■■□□□ 1.28
CCDC47-202ENST00000403162 DDX41Q9UJV9 622 aaKnown RBP23.03■■□□□ 1.28
CCDC47-202ENST00000403162 ZHX1Q9UKY1 873 aaPredicted RBP23.03■■□□□ 1.28
CCDC47-202ENST00000403162 EYA2O00167 538 aa23.02■■□□□ 1.28
CCDC47-202ENST00000403162 CIAO1O76071 339 aa23.02■■□□□ 1.28
CCDC47-202ENST00000403162 HSP90AB3PQ58FF7 597 aa23.02■■□□□ 1.28
CCDC47-202ENST00000403162 CHST3Q7LGC8 479 aa23.02■■□□□ 1.28
CCDC47-202ENST00000403162 ISCA1Q9BUE6 129 aa23.02■■□□□ 1.28
CCDC47-202ENST00000403162 NEDD4P46934 1319 aa23.01■■□□□ 1.27
CCDC47-202ENST00000403162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.01■■□□□ 1.27
CCDC47-202ENST00000403162 M0R2C6 588 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms