RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 KRT26Q7Z3Y9 468 aa16.62■□□□□ 0.25
SNED1-203ENST00000401644 SULF1Q8IWU6 871 aa16.62■□□□□ 0.25
SNED1-203ENST00000401644 JMYQ8N9B5 988 aa16.62■□□□□ 0.25
SNED1-203ENST00000401644 SPATA5Q8NB90 893 aa16.62■□□□□ 0.25
SNED1-203ENST00000401644 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
SNED1-203ENST00000401644 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
SNED1-203ENST00000401644 DBNLQ9UJU6 430 aaKnown RBP16.62■□□□□ 0.25
SNED1-203ENST00000401644 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
SNED1-203ENST00000401644 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 CRKP46108 304 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
SNED1-203ENST00000401644 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 TEKT1Q969V4 418 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
SNED1-203ENST00000401644 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
SNED1-203ENST00000401644 IGSF3O75054 1194 aa16.6■□□□□ 0.25
SNED1-203ENST00000401644 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
SNED1-203ENST00000401644 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
SNED1-203ENST00000401644 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
SNED1-203ENST00000401644 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
SNED1-203ENST00000401644 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
SNED1-203ENST00000401644 COL1A1P02452 1464 aaPredicted RBP16.6■□□□□ 0.25
SNED1-203ENST00000401644 MCAMP43121 646 aa16.59■□□□□ 0.25
SNED1-203ENST00000401644 GRIK5Q16478 980 aa16.59■□□□□ 0.25
SNED1-203ENST00000401644 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
SNED1-203ENST00000401644 PRMT6Q96LA8 375 aaPredicted RBP16.59■□□□□ 0.25
SNED1-203ENST00000401644 ZDHHC15Q96MV8 337 aa16.59■□□□□ 0.25
SNED1-203ENST00000401644 ABCF2Q9UG63 623 aa16.59■□□□□ 0.25
SNED1-203ENST00000401644 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
SNED1-203ENST00000401644 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
SNED1-203ENST00000401644 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
SNED1-203ENST00000401644 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
SNED1-203ENST00000401644 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
SNED1-203ENST00000401644 RWDD1Q9H446 243 aaPredicted RBP16.58■□□□□ 0.24
SNED1-203ENST00000401644 TLR7Q9NYK1 1049 aaKnown RBP16.58■□□□□ 0.24
SNED1-203ENST00000401644 ASTN2O75129 1339 aaPredicted RBP16.58■□□□□ 0.24
SNED1-203ENST00000401644 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
SNED1-203ENST00000401644 AKAP11Q9UKA4 1901 aa16.58■□□□□ 0.24
SNED1-203ENST00000401644 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
SNED1-203ENST00000401644 PRDX5P30044 214 aa16.57■□□□□ 0.24
SNED1-203ENST00000401644 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNED1-203ENST00000401644 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
SNED1-203ENST00000401644 PCNTO95613 3336 aa16.57■□□□□ 0.24
SNED1-203ENST00000401644 MYH2Q9UKX2 1941 aa16.57■□□□□ 0.24
SNED1-203ENST00000401644 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 LDHCP07864 332 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 GSTO1P78417 241 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 TNFAIP1Q13829 316 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 DZIP1Q86YF9 867 aaKnown RBP16.56■□□□□ 0.24
SNED1-203ENST00000401644 FAM163AQ96GL9 167 aaPredicted RBP16.56■□□□□ 0.24
SNED1-203ENST00000401644 ZNF408Q9H9D4 720 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 LRP2BPQ9P2M1 347 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 PCDHAC2Q9Y5I4 1007 aa16.56■□□□□ 0.24
SNED1-203ENST00000401644 ADM5C9JUS6 153 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 VEGFBP49765 207 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
SNED1-203ENST00000401644 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
SNED1-203ENST00000401644 PPP2R3BQ9Y5P8 575 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 TLL2Q9Y6L7 1015 aa16.55■□□□□ 0.24
SNED1-203ENST00000401644 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
SNED1-203ENST00000401644 CYP2E1P05181 493 aaPredicted RBP16.54■□□□□ 0.24
SNED1-203ENST00000401644 ZAP70P43403 619 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 APOBEC3HQ6NTF7 200 aaKnown RBP16.54■□□□□ 0.24
SNED1-203ENST00000401644 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 CDCA5Q96FF9 252 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 GPATCH3Q96I76 525 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 VEZTQ9HBM0 779 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
SNED1-203ENST00000401644 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 ATP5JP18859 108 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 NF2P35240 595 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 TNNI2P48788 182 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 MECOMQ03112 1051 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
SNED1-203ENST00000401644 DIXDC1Q155Q3 683 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 FKBP1CQ5VVH2 108 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
SNED1-203ENST00000401644 C2orf69Q8N8R5 385 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 DEFB129Q9H1M3 183 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 DAGLAQ9Y4D2 1042 aa16.53■□□□□ 0.24
SNED1-203ENST00000401644 GAKO14976 1311 aa16.52■□□□□ 0.24
SNED1-203ENST00000401644 ANKRD45Q5TZF3 282 aa16.52■□□□□ 0.24
SNED1-203ENST00000401644 NSUN4Q96CB9 384 aaKnown RBP16.52■□□□□ 0.24
SNED1-203ENST00000401644 SCAF8Q9UPN6 1271 aaKnown RBP16.52■□□□□ 0.24
SNED1-203ENST00000401644 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
SNED1-203ENST00000401644 MAP4K4O95819 1239 aaPredicted RBP16.51■□□□□ 0.23
SNED1-203ENST00000401644 FKBP1BP68106 108 aa16.51■□□□□ 0.23
SNED1-203ENST00000401644 IRX6P78412 446 aaPredicted RBP16.51■□□□□ 0.23
SNED1-203ENST00000401644 MAP3K12Q12852 859 aa16.51■□□□□ 0.23
SNED1-203ENST00000401644 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
SNED1-203ENST00000401644 GBA2Q9HCG7 927 aaPredicted RBP16.51■□□□□ 0.23
SNED1-203ENST00000401644 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms