RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 CYP7A1P22680 504 aa23.31■■□□□ 1.32
AC008060.1-201ENST00000401499 GTF2IP78347 998 aa23.31■■□□□ 1.32
AC008060.1-201ENST00000401499 SOGA3Q5TF21 947 aa23.31■■□□□ 1.32
AC008060.1-201ENST00000401499 DSCC1Q9BVC3 393 aa23.31■■□□□ 1.32
AC008060.1-201ENST00000401499 PSME4Q14997 1843 aa23.3■■□□□ 1.32
AC008060.1-201ENST00000401499 SPTY2D1Q68D10 685 aaPredicted RBP23.3■■□□□ 1.32
AC008060.1-201ENST00000401499 NAA16Q6N069 864 aaPredicted RBP23.3■■□□□ 1.32
AC008060.1-201ENST00000401499 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
AC008060.1-201ENST00000401499 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
AC008060.1-201ENST00000401499 ECE2O60344 883 aa23.29■■□□□ 1.32
AC008060.1-201ENST00000401499 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
AC008060.1-201ENST00000401499 RASEFQ8IZ41 740 aa23.29■■□□□ 1.32
AC008060.1-201ENST00000401499 KCNB2Q92953 911 aa23.29■■□□□ 1.32
AC008060.1-201ENST00000401499 G3V3G9 751 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 PPIP5K2O43314 1243 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 MBD4O95243 580 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 LDHBP07195 334 aaKnown RBP23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 ANAPC15P60006 121 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 MFSD14BQ5SR56 506 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 MIGA1Q8NAN2 632 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 TBC1D22AQ8WUA7 517 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 STRBPQ96SI9 672 aaKnown RBP23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 KCNQ5Q9NR82 932 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 BCS1LQ9Y276 419 aa23.28■■□□□ 1.32
AC008060.1-201ENST00000401499 CREB3L3Q68CJ9 461 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 LCORLQ8N3X6 602 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 AIDAQ96BJ3 306 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 ARMT1Q9H993 441 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 ZNF277Q9NRM2 450 aaPredicted RBP23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 SNX14Q9Y5W7 946 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 IGSF3O75054 1194 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 DZIP1Q86YF9 867 aaKnown RBP23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 CERS5Q8N5B7 392 aa23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 FHDC1Q9C0D6 1143 aaPredicted RBP23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 U3KPZ7 1027 aaPredicted RBP23.27■■□□□ 1.32
AC008060.1-201ENST00000401499 SLC27A2O14975 620 aa23.26■■□□□ 1.31
AC008060.1-201ENST00000401499 TTLL5Q6EMB2 1281 aa23.26■■□□□ 1.31
AC008060.1-201ENST00000401499 FBXW7Q969H0 707 aa23.26■■□□□ 1.31
AC008060.1-201ENST00000401499 RIOK1Q9BRS2 568 aaKnown RBP23.26■■□□□ 1.31
AC008060.1-201ENST00000401499 TAF6LQ9Y6J9 622 aa23.26■■□□□ 1.31
AC008060.1-201ENST00000401499 LAMA4Q16363 1823 aa23.25■■□□□ 1.31
AC008060.1-201ENST00000401499 TMED8Q6PL24 325 aaPredicted RBP23.25■■□□□ 1.31
AC008060.1-201ENST00000401499 MXD3Q9BW11 206 aa23.25■■□□□ 1.31
AC008060.1-201ENST00000401499 MAGEB6P1A0A0J9YX57 407 aa23.24■■□□□ 1.31
AC008060.1-201ENST00000401499 YDJCA8MPS7 323 aa23.24■■□□□ 1.31
AC008060.1-201ENST00000401499 NFKBIEO00221 500 aa23.24■■□□□ 1.31
AC008060.1-201ENST00000401499 DIXDC1Q155Q3 683 aa23.24■■□□□ 1.31
AC008060.1-201ENST00000401499 ADAMTSL1Q8N6G6 1762 aa23.24■■□□□ 1.31
AC008060.1-201ENST00000401499 DYNLL1P63167 89 aaKnown RBP23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 RABEP1Q15276 862 aa23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 DDRGK1Q96HY6 314 aa23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 PRKAB2O43741 272 aa23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 CYP21A2P08686 494 aa23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 IPO9Q96P70 1041 aaKnown RBP23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 VPS33BQ9H267 617 aa23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 TAOK3Q9H2K8 898 aa23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 EPB41L4AQ9HCS5 686 aaPredicted RBP23.23■■□□□ 1.31
AC008060.1-201ENST00000401499 FGAP02671 866 aa23.22■■□□□ 1.31
AC008060.1-201ENST00000401499 IARSP41252 1262 aaKnown RBP23.22■■□□□ 1.31
AC008060.1-201ENST00000401499 DACT2Q5SW24 774 aa23.22■■□□□ 1.31
AC008060.1-201ENST00000401499 STRIP1Q5VSL9 837 aa23.22■■□□□ 1.31
AC008060.1-201ENST00000401499 LARGE2Q8N3Y3 721 aa23.22■■□□□ 1.31
AC008060.1-201ENST00000401499 CDK5RAP2Q96SN8 1893 aa23.21■■□□□ 1.31
AC008060.1-201ENST00000401499 GSTO1P78417 241 aa23.21■■□□□ 1.31
AC008060.1-201ENST00000401499 ADCK5Q3MIX3 580 aa23.21■■□□□ 1.31
AC008060.1-201ENST00000401499 AATFQ9NY61 560 aaKnown RBP eCLIP23.21■■□□□ 1.31
AC008060.1-201ENST00000401499 SUGT1Q9Y2Z0 365 aa23.21■■□□□ 1.31
AC008060.1-201ENST00000401499 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
AC008060.1-201ENST00000401499 GSG1L2A8MUP6 293 aa23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 PATL2C9JE40 543 aaKnown RBP23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 TSGA10IPQ3SY00 556 aa23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 SLC4A4Q9Y6R1 1079 aa23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 RPAP1Q9BWH6 1393 aaPredicted RBP23.2■■□□□ 1.3
AC008060.1-201ENST00000401499 USP17L3A6NCW0 530 aa23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 USP17L4A6NCW7 530 aa23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 ZKSCAN1P17029 563 aaPredicted RBP23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 GNAT2P19087 354 aa23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 FKBP1AP62942 108 aaKnown RBP23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 USP17L1Q7RTZ2 530 aa23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 ZMYM6O95789 1325 aa23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 LTBP3Q9NS15 1303 aa23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 BAZ2AQ9UIF9 1905 aaKnown RBP23.19■■□□□ 1.3
AC008060.1-201ENST00000401499 ALX1Q15699 326 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 IFNL3Q8IZI9 196 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 SYT17Q9BSW7 474 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 TBC1D2Q9BYX2 928 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 GAKO14976 1311 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 F8W031 263 aaPredicted RBP23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 APPP05067 770 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 LDHCP07864 332 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 RASSF7Q02833 373 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 COL9A3Q14050 684 aaPredicted RBP23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 SDR42E1Q8WUS8 393 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 UPF3BQ9BZI7 483 aaKnown RBP23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 CTNNA3Q9UI47 895 aa23.18■■□□□ 1.3
AC008060.1-201ENST00000401499 PRELPP51888 382 aa23.17■■□□□ 1.3
AC008060.1-201ENST00000401499 STOX1Q6ZVD7 989 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms