RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PI4K2BQ8TCG2 481 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 MYH8P13535 1937 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 DOCK1Q14185 1865 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 ATRNL1Q5VV63 1379 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 GREB1LQ9C091 1923 aaPredicted RBP9.17□□□□□ -0.94
USP16-204ENST00000399976 TOMM70O94826 608 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 MX1P20591 662 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 MFSD14BQ5SR56 506 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 GORABQ5T7V8 394 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 ZBTB47Q9UFB7 747 aaPredicted RBP9.17□□□□□ -0.94
USP16-204ENST00000399976 CNOT7Q9UIV1 285 aaKnown RBP9.17□□□□□ -0.94
USP16-204ENST00000399976 MROH7-TTC4A0A0A0MT08 1334 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 IGHDP01880 384 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 GTF2IP78347 998 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 SMC1BQ8NDV3 1235 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 HOOK2Q96ED9 719 aa9.17□□□□□ -0.94
USP16-204ENST00000399976 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
USP16-204ENST00000399976 POLR2AP24928 1970 aaKnown RBP9.16□□□□□ -0.94
USP16-204ENST00000399976 GPR75-ASB3A0A0A6YYF3 556 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 DDNO94850 711 aaPredicted RBP9.16□□□□□ -0.94
USP16-204ENST00000399976 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
USP16-204ENST00000399976 UBE3CQ15386 1083 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 MICALL2Q8IY33 904 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 TEKT1Q969V4 418 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 IDI2Q9BXS1 227 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 ZMYM6O95789 1325 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 PASKQ96RG2 1323 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 SPDYE2BA6NHP3 402 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 SPDYE6P0CI01 402 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 FKBP1BP68106 108 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 TNFAIP1Q13829 316 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 SPDYE2Q495Y8 402 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 NEUROD6Q96NK8 337 aa9.16□□□□□ -0.94
USP16-204ENST00000399976 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.16□□□□□ -0.948e-8■□□□□ 11.1
USP16-204ENST00000399976 WTIPA6NIX2 430 aaPredicted RBP9.15□□□□□ -0.94
USP16-204ENST00000399976 RAD17O75943 681 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 PDE1AP54750 535 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 KIF4BQ2VIQ3 1234 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 NSUN4Q96CB9 384 aaKnown RBP9.15□□□□□ -0.94
USP16-204ENST00000399976 GPR101Q96P66 508 aaPredicted RBP9.15□□□□□ -0.94
USP16-204ENST00000399976 SNRKQ9NRH2 765 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 HIP1O00291 1037 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 ENTPD3O75355 529 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 CYP2E1P05181 493 aaPredicted RBP9.15□□□□□ -0.94
USP16-204ENST00000399976 MAP3K12Q12852 859 aa9.15□□□□□ -0.94
USP16-204ENST00000399976 PHIPQ8WWQ0 1821 aa9.15□□□□□ -0.95
USP16-204ENST00000399976 GIMAP6Q6P9H5 292 aa9.15□□□□□ -0.95
USP16-204ENST00000399976 KBTBD3Q8NAB2 608 aa9.15□□□□□ -0.95
USP16-204ENST00000399976 EVI5LQ96CN4 794 aa9.15□□□□□ -0.95
USP16-204ENST00000399976 GINM1Q9NU53 330 aa9.15□□□□□ -0.95
USP16-204ENST00000399976 PAG1Q9NWQ8 432 aa9.15□□□□□ -0.95
USP16-204ENST00000399976 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.95
USP16-204ENST00000399976 MYO1BO43795 1136 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 CRKP46108 304 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 MAP3K10Q02779 954 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 PLEKHM2Q8IWE5 1019 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 RAD50Q92878 1312 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 SNAP23O00161 211 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 EPB41L2O43491 1005 aaKnown RBP9.14□□□□□ -0.95
USP16-204ENST00000399976 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 IL1RAPL2Q9NP60 686 aa9.14□□□□□ -0.95
USP16-204ENST00000399976 TTF2Q9UNY4 1162 aaKnown RBP9.14□□□□□ -0.95
USP16-204ENST00000399976 LOC285556D6RIA3 1793 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 TCRBV5S4A2TA0A5A2 114 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 EIF5BO60841 1220 aaKnown RBP9.13□□□□□ -0.95
USP16-204ENST00000399976 TNNI2P48788 182 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 DLGAP5Q15398 846 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 ANKRD45Q5TZF3 282 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
USP16-204ENST00000399976 CCDC8Q9H0W5 538 aaPredicted RBP9.13□□□□□ -0.95
USP16-204ENST00000399976 KCNQ5Q9NR82 932 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 FRAT2O75474 233 aaPredicted RBP9.13□□□□□ -0.95
USP16-204ENST00000399976 BAG3O95817 575 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 SCARF1Q14162 830 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 DAGLAQ9Y4D2 1042 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 GJA3Q9Y6H8 435 aa9.13□□□□□ -0.95
USP16-204ENST00000399976 WNT10BO00744 389 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 ADD2P35612 726 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 CFAP100Q494V2 611 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 APOBEC3HQ6NTF7 200 aaKnown RBP9.12□□□□□ -0.95
USP16-204ENST00000399976 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 TBC1D12O60347 775 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 GNAT2P19087 354 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 EPS15P42566 896 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 ZAP70P43403 619 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 MECOMQ03112 1051 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
USP16-204ENST00000399976 C16orf71Q8IYS4 520 aaPredicted RBP9.12□□□□□ -0.95
USP16-204ENST00000399976 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
USP16-204ENST00000399976 CNTROBQ8N137 903 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 NMRK2Q9NPI5 230 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms