RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 KRT10P13645 584 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 RFX1P22670 979 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 ZC3H6P61129 1189 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 TTF1Q15361 905 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 RASGRF2O14827 1237 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 MRPS15P82914 257 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 SH2B1Q9NRF2 756 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 RNF40O75150 1001 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 STK26Q9P289 416 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 PNMA2Q9UL42 364 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 FAM95CA0A1B0GW59 222 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 JADE1Q6IE81 842 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 IFT20Q8IY31 132 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 MIA2Q96PC5 1412 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 DYNC1I2Q13409 638 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 KRT5P13647 590 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 OR9Q1Q8NGQ5 310 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 CNNM3Q8NE01 707 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 RFWD2Q8NHY2 731 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 DBNLQ9UJU6 430 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 SESN3P58005 492 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 BMP15O95972 392 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 PPANQ9NQ55 473 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 LMNB1P20700 586 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 HOXC8P31273 242 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 UBL4BQ8N7F7 174 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 EXOC1Q9NV70 894 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TROVE2P10155 538 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 RBM5P52756 815 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 AHI1Q8N157 1196 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 RASA3Q14644 834 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 ENOX1Q8TC92 643 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 NLRP4Q96MN2 994 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 LRRC37BQ96QE4 947 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 MYH11P35749 1972 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 SMIM23A6NLE4 172 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 DDX19AQ9NUU7 478 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TLK1Q9UKI8 766 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 MTMR3Q13615 1198 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TMTC4Q5T4D3 741 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TSPY2A6NKD2 308 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TSPY3P0CV98 308 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TSPY8P0CW00 308 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 HDAC4P56524 1084 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 TSPY1Q01534 308 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 NPR1P16066 1061 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 SYTL2Q9HCH5 934 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 SLC13A4Q9UKG4 626 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 SYCE3A1L190 88 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 PHACTR2O75167 634 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 KIF23Q02241 960 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 ATF7IPQ6VMQ6 1270 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 KIFAP3Q92845 792 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 ACTR5Q9H9F9 607 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
CACNA1C-220ENST00000399655 DTNBP1Q96EV8 351 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 C19orf60Q96EN9 201 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 TTC1Q99614 292 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 UVSSAQ2YD98 709 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 TMTC1Q8IUR5 882 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 SH3GL3Q99963 347 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 KRBA2Q6ZNG9 492 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 CPLX3Q8WVH0 158 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 CNNM1Q9NRU3 951 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 PRG3Q9Y2Y8 225 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 RNASELQ05823 741 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 DUSP27Q5VZP5 1158 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 TMC6Q7Z403 805 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 SMAP1Q8IYB5 467 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 RILPQ96NA2 401 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 ARHGAP35Q9NRY4 1499 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 KIAA2013Q8IYS2 634 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 PEX19P40855 299 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 ZNF165P49910 485 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 LAMC2Q13753 1193 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 TLK2Q86UE8 772 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 NR1H4Q96RI1 486 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 SMARCAD1Q9H4L7 1026 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 IPO11Q9UI26 975 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 TRIM68Q6AZZ1 485 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 PNMA8AQ86V59 439 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 SERPINB2P05120 415 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 CCDC194A0A1B0GVG4 234 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 HHATQ5VTY9 493 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 PDCD10Q9BUL8 212 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
CACNA1C-220ENST00000399655 CNTRLQ7Z7A1 2325 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 FKBP4Q02790 459 aaKnown RBP eCLIP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 TRIM56Q9BRZ2 755 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 CFAP221Q4G0U5 840 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 PLEKHM3Q6ZWE6 761 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 MPP6Q9NZW5 540 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms