RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TRIM47Q96LD4 638 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 CLSTN2Q9H4D0 955 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 MAST3O60307 1309 aa12.37□□□□□ -0.43
CACNA1C-216ENST00000399638 TRIM37O94972 964 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 KRT19P08727 400 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 TTLL3Q9Y4R7 772 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 NPC1L1Q9UHC9 1359 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-216ENST00000399638 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 CASQ1P31415 396 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 Q3C1V9 767 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 WDR44Q5JSH3 913 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 FAM114A2Q9NRY5 505 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 KIAA0586Q9BVV6 1533 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 TCP10L2B9ZVM9 353 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 OSBPP22059 807 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 RTN1Q16799 776 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 ANAPC4Q9UJX5 808 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 USH1GQ495M9 461 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 SESTD1Q86VW0 696 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 GLG1Q92896 1179 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 GCC2Q8IWJ2 1684 aa12.35□□□□□ -0.43
CACNA1C-216ENST00000399638 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 TNFAIP1Q13829 316 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 PSMD6Q15008 389 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 BMP2KLQ5H9B9 411 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 SPAG5Q96R06 1193 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 KIF2AO00139 706 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 SMIM23A6NLE4 172 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 STX10O60499 249 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 TSTA3Q13630 321 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 KIAA0753Q2KHM9 967 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 PPP1R21Q6ZMI0 780 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
CACNA1C-216ENST00000399638 NSD2O96028 1365 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 E7EVH7 732 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 KIF3CO14782 793 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 SSFA2P28290 1259 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 XPAP23025 273 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 CALML3P27482 149 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 GTF2F1P35269 517 aaKnown RBP eCLIP12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 SMTNP53814 917 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 PYM1Q9BRP8 204 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 LMCD1Q9NZU5 365 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 TOP1P11387 765 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 ASIC1P78348 528 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 SLC9A5Q14940 896 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms