RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
UFD1-202ENST00000399523 PRO3102Q9H379 93 aa23.08■■□□□ 1.29
UFD1-202ENST00000399523 TDRD3Q9H7E2 651 aaKnown RBP23.08■■□□□ 1.29
UFD1-202ENST00000399523 FAM205AQ6ZU69 1335 aa23.08■■□□□ 1.28
UFD1-202ENST00000399523 DLL1O00548 723 aa23.07■■□□□ 1.28
UFD1-202ENST00000399523 G2E3Q7L622 706 aa23.07■■□□□ 1.28
UFD1-202ENST00000399523 DPF3Q92784 378 aa23.07■■□□□ 1.28
UFD1-202ENST00000399523 CSADQ9Y600 493 aa23.07■■□□□ 1.28
UFD1-202ENST00000399523 SPDYE5A6NIY4 337 aa23.06■■□□□ 1.28
UFD1-202ENST00000399523 LAMA3Q16787 3333 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 CETPP11597 493 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 UBE2Q1Q7Z7E8 422 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 DZIP1LQ8IYY4 767 aaKnown RBP23.05■■□□□ 1.28
UFD1-202ENST00000399523 SLC17A8Q8NDX2 589 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 TMEM39BQ9GZU3 492 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 ARAP2Q8WZ64 1704 aa23.05■■□□□ 1.28
UFD1-202ENST00000399523 BTBD19C9JJ37 291 aa23.04■■□□□ 1.28
UFD1-202ENST00000399523 IFIT5Q13325 482 aaKnown RBP23.04■■□□□ 1.28
UFD1-202ENST00000399523 MTFR1Q15390 333 aa23.04■■□□□ 1.28
UFD1-202ENST00000399523 MFSD14BQ5SR56 506 aa23.04■■□□□ 1.28
UFD1-202ENST00000399523 NKX2-3Q8TAU0 364 aa23.04■■□□□ 1.28
UFD1-202ENST00000399523 TTF2Q9UNY4 1162 aaKnown RBP23.04■■□□□ 1.28
UFD1-202ENST00000399523 TCP10L2B9ZVM9 353 aa23.03■■□□□ 1.28
UFD1-202ENST00000399523 TNNI2P48788 182 aa23.03■■□□□ 1.28
UFD1-202ENST00000399523 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
UFD1-202ENST00000399523 TDRD7Q8NHU6 1098 aaKnown RBP23.03■■□□□ 1.28
UFD1-202ENST00000399523 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
UFD1-202ENST00000399523 FOXO4P98177 505 aa23.02■■□□□ 1.28
UFD1-202ENST00000399523 ERO1BQ86YB8 467 aa23.02■■□□□ 1.28
UFD1-202ENST00000399523 SNCAIPQ9Y6H5 919 aa23.02■■□□□ 1.28
UFD1-202ENST00000399523 GJA8P48165 433 aa23.01■■□□□ 1.27
UFD1-202ENST00000399523 SNAPC2Q13487 334 aa23.01■■□□□ 1.27
UFD1-202ENST00000399523 C17orf99Q6UX52 265 aa23.01■■□□□ 1.27
UFD1-202ENST00000399523 HTATIP2Q9BUP3 242 aa23.01■■□□□ 1.27
UFD1-202ENST00000399523 SRRDQ9UH36 339 aa23.01■■□□□ 1.27
UFD1-202ENST00000399523 IRF6O14896 467 aa23■■□□□ 1.27
UFD1-202ENST00000399523 GJB1P08034 283 aa23■■□□□ 1.27
UFD1-202ENST00000399523 CTGFP29279 349 aa23■■□□□ 1.27
UFD1-202ENST00000399523 CRKP46108 304 aa23■■□□□ 1.27
UFD1-202ENST00000399523 DNAAF4Q8WXU2 420 aa23■■□□□ 1.27
UFD1-202ENST00000399523 FLIIQ13045 1269 aa22.99■■□□□ 1.27
UFD1-202ENST00000399523 NR2E3Q9Y5X4 410 aa22.99■■□□□ 1.27
UFD1-202ENST00000399523 HOXD10P28358 340 aa22.98■■□□□ 1.27
UFD1-202ENST00000399523 GRK4P32298 578 aa22.98■■□□□ 1.27
UFD1-202ENST00000399523 PSMC4P43686 418 aa22.98■■□□□ 1.27
UFD1-202ENST00000399523 PPIL2Q13356 520 aa22.98■■□□□ 1.27
UFD1-202ENST00000399523 TSR2Q969E8 191 aaKnown RBP22.98■■□□□ 1.27
UFD1-202ENST00000399523 TRIM47Q96LD4 638 aa22.98■■□□□ 1.27
UFD1-202ENST00000399523 RIPOR2Q9Y4F9 1068 aa22.98■■□□□ 1.27
UFD1-202ENST00000399523 A0A1W2PPC1 479 aa22.97■■□□□ 1.27
UFD1-202ENST00000399523 PLIN1O60240 522 aa22.97■■□□□ 1.27
UFD1-202ENST00000399523 TWISTNBQ3B726 338 aaPredicted RBP22.97■■□□□ 1.27
UFD1-202ENST00000399523 LDHAL6AQ6ZMR3 332 aa22.97■■□□□ 1.27
UFD1-202ENST00000399523 ZKSCAN4Q969J2 545 aaPredicted RBP22.97■■□□□ 1.27
UFD1-202ENST00000399523 WRNIP1Q96S55 665 aa22.97■■□□□ 1.27
UFD1-202ENST00000399523 CACNA1FO60840 1977 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 ZBTB7BO15156 539 aaPredicted RBP22.96■■□□□ 1.27
UFD1-202ENST00000399523 CCL5P13501 91 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 OSBPP22059 807 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 HIBADHP31937 336 aaKnown RBP22.96■■□□□ 1.27
UFD1-202ENST00000399523 HDLBPQ00341 1268 aaKnown RBP22.96■■□□□ 1.27
UFD1-202ENST00000399523 UBE4AQ14139 1066 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 RAET1EQ8TD07 263 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 FAM84BQ96KN1 310 aaPredicted RBP22.96■■□□□ 1.27
UFD1-202ENST00000399523 CPA4Q9UI42 421 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 CHMP3Q9Y3E7 222 aa22.96■■□□□ 1.27
UFD1-202ENST00000399523 GYG1P46976 350 aa22.95■■□□□ 1.26
UFD1-202ENST00000399523 FKBP5Q13451 457 aaPredicted RBP22.95■■□□□ 1.26
UFD1-202ENST00000399523 LMBR1LQ6UX01 489 aa22.95■■□□□ 1.26
UFD1-202ENST00000399523 ZNF594Q96JF6 807 aaPredicted RBP22.95■■□□□ 1.26
UFD1-202ENST00000399523 ADGRA2Q96PE1 1338 aa22.95■■□□□ 1.26
UFD1-202ENST00000399523 PPATQ06203 517 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 CCDC57Q2TAC2 916 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 ANKRD23Q86SG2 305 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 FAM83AQ86UY5 434 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 HOOK2Q96ED9 719 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 RNF208Q9H0X6 261 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 CNNM1Q9NRU3 951 aa22.94■■□□□ 1.26
UFD1-202ENST00000399523 ECM2O94769 699 aaPredicted RBP22.93■■□□□ 1.26
UFD1-202ENST00000399523 GRIK5Q16478 980 aa22.93■■□□□ 1.26
UFD1-202ENST00000399523 EPHA10Q5JZY3 1008 aa22.93■■□□□ 1.26
UFD1-202ENST00000399523 MYPNQ86TC9 1320 aa22.92■■□□□ 1.26
UFD1-202ENST00000399523 FMNL1O95466 1100 aaPredicted RBP22.92■■□□□ 1.26
UFD1-202ENST00000399523 CACNB3P54284 484 aa22.92■■□□□ 1.26
UFD1-202ENST00000399523 TAF7LQ5H9L4 462 aa22.92■■□□□ 1.26
UFD1-202ENST00000399523 FKBP1CQ5VVH2 108 aa22.92■■□□□ 1.26
UFD1-202ENST00000399523 PDHXO00330 501 aa22.91■■□□□ 1.26
UFD1-202ENST00000399523 SOX1O00570 391 aaPredicted RBP22.91■■□□□ 1.26
UFD1-202ENST00000399523 FARP2O94887 1054 aaPredicted RBP22.91■■□□□ 1.26
UFD1-202ENST00000399523 UBXN2AP68543 259 aa22.91■■□□□ 1.26
UFD1-202ENST00000399523 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
UFD1-202ENST00000399523 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.91■■□□□ 1.26
UFD1-202ENST00000399523 U2AF1L4Q8WU68 220 aaKnown RBP22.91■■□□□ 1.26
UFD1-202ENST00000399523 MRIQ9BWK5 157 aa22.91■■□□□ 1.26
UFD1-202ENST00000399523 DCAF15Q66K64 600 aa22.9■■□□□ 1.26
UFD1-202ENST00000399523 TEKT1Q969V4 418 aa22.9■■□□□ 1.26
UFD1-202ENST00000399523 ZDHHC15Q96MV8 337 aa22.9■■□□□ 1.26
UFD1-202ENST00000399523 BIN2Q9UBW5 565 aaPredicted RBP22.9■■□□□ 1.26
UFD1-202ENST00000399523 KCNH4Q9UQ05 1017 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms