RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 CCDC110Q8TBZ0 833 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 H0YIN7 160 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 BIRC3Q13489 604 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 OPA1O60313 960 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 CCDC160A6NGH7 325 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 TRPM2O94759 1503 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 FAM184BQ9ULE4 1060 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 UBXN1Q04323 297 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 SATB1Q01826 763 aa13.05□□□□□ -0.32
CCDC144A-206ENST00000399273 CFAP74Q9C0B2 1584 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 KDM5AP29375 1690 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 KIF22Q14807 665 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 SUPT20HQ8NEM7 779 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 VIMP08670 466 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 PDE6BP35913 854 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 TERF1P54274 439 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 ATP5DP30049 168 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 DNM2P50570 870 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 HAUS3Q68CZ6 603 aa13.04□□□□□ -0.32
CCDC144A-206ENST00000399273 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 CDCA7Q9BWT1 371 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 PLCH2O75038 1416 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 HARSP12081 509 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 PPANQ9NQ55 473 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 KSR2Q6VAB6 950 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 DHX58Q96C10 678 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 AZI2Q9H6S1 392 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 FAM204AQ9H8W3 233 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 NR1I2O75469 434 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 CCDC169A6NNP5 214 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
CCDC144A-206ENST00000399273 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 CTAGE8P0CG41 777 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 ZNF518AQ6AHZ1 1483 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 PPP1R2P41236 205 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 LIN9Q5TKA1 542 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 ALDH1L1O75891 902 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 KRT9P35527 623 aa13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.32
CCDC144A-206ENST00000399273 CCDC25Q86WR0 208 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 BRF1Q92994 677 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 SWAP70Q9UH65 585 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 CCNT1O60563 726 aaKnown RBP13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 ITIH3Q06033 890 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 MIGA1Q8NAN2 632 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 UFL1O94874 794 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 UVSSAQ2YD98 709 aa13.02□□□□□ -0.33
CCDC144A-206ENST00000399273 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 ZSWIM4Q9H7M6 989 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 GGA1Q9UJY5 639 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 GINS2Q9Y248 185 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 TSHZ3Q63HK5 1081 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 RBM8AQ9Y5S9 174 aaKnown RBP13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 ANO6Q4KMQ2 910 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
CCDC144A-206ENST00000399273 CALCOCO2Q13137 446 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms