RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PARP3Q9Y6F1 533 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
APOB-202ENST00000399256 YEATS4O95619 227 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 TEX35Q5T0J7 233 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 LMOD2Q6P5Q4 547 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
APOB-202ENST00000399256 ST5P78524 1137 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 SYNE3Q6ZMZ3 975 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 TNS3Q68CZ2 1445 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 TULP2O00295 520 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 SASH3O75995 380 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 HAND2P61296 217 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 MAST3O60307 1309 aa16.16■□□□□ 0.18
APOB-202ENST00000399256 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
APOB-202ENST00000399256 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
APOB-202ENST00000399256 DHX8Q14562 1220 aaKnown RBP16.15■□□□□ 0.18
APOB-202ENST00000399256 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
APOB-202ENST00000399256 ZMYM1Q5SVZ6 1142 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 IKBKBO14920 756 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 TIMM10P62072 90 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 AXDND1Q5T1B0 1012 aaPredicted RBP16.15■□□□□ 0.18
APOB-202ENST00000399256 ANO1Q5XXA6 986 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 ANKRD13DQ6ZTN6 518 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
APOB-202ENST00000399256 OAS2P29728 719 aaKnown RBP16.14■□□□□ 0.18
APOB-202ENST00000399256 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.18
APOB-202ENST00000399256 SMARCE1Q969G3 411 aa16.14■□□□□ 0.18
APOB-202ENST00000399256 SRRTQ9BXP5 876 aaKnown RBP16.14■□□□□ 0.18
APOB-202ENST00000399256 A0A087WZG4 1122 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 KLF18A0A0U1RQI7 1052 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 M0R2C6 588 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 TOP1P11387 765 aaKnown RBP16.14■□□□□ 0.17
APOB-202ENST00000399256 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 TBC1D8O95759 1140 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 GCP02774 474 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 PNOCQ13519 176 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
APOB-202ENST00000399256 CBFA2T2O43439 604 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 CMA1P23946 247 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 MYL5Q02045 173 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 LMBR1LQ6UX01 489 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 PPP2R2CQ9Y2T4 447 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 SYKP43405 635 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 RAD51AP2Q09MP3 1159 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
APOB-202ENST00000399256 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
APOB-202ENST00000399256 VSTM4Q8IW00 320 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 WDR24Q96S15 920 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
APOB-202ENST00000399256 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 GNG11P61952 73 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 BRAPQ7Z569 592 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 CPLX1O14810 134 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 ZSCAN12O43309 604 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 CASQ1P31415 396 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 KIF23Q02241 960 aaPredicted RBP16.12■□□□□ 0.17
APOB-202ENST00000399256 PDILTQ8N807 584 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 FANCLQ9NW38 375 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 PRC1O43663 620 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 TPM1P09493 284 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 SMC1AQ14683 1233 aaKnown RBP16.12■□□□□ 0.17
APOB-202ENST00000399256 KRBA2Q6ZNG9 492 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
APOB-202ENST00000399256 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
APOB-202ENST00000399256 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
APOB-202ENST00000399256 GYS2P54840 703 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 TMEM139Q8IV31 216 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 AIFM3Q96NN9 605 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 OVOS2A0A0G2JMS6 1433 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 TUBE1Q9UJT0 475 aa16.11■□□□□ 0.17
APOB-202ENST00000399256 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
APOB-202ENST00000399256 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 ARHGEF25Q86VW2 580 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 OSBP2Q969R2 916 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 C5P01031 1676 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 TOGARAM2Q6ZUX3 1019 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 ZBTB9Q96C00 473 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 ZNF496Q96IT1 587 aaPredicted RBP16.1■□□□□ 0.17
APOB-202ENST00000399256 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 ARHGAP6O43182 974 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 SLC39A14Q15043 492 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 OLFM4Q6UX06 510 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 CLIC6Q96NY7 704 aa16.1■□□□□ 0.17
APOB-202ENST00000399256 TRIM34Q9BYJ4 488 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms