RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 ARHGEF10LQ9HCE6 1279 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 CEP131Q9UPN4 1083 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
GAREM1-202ENST00000399218 KLHL10Q6JEL2 608 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 TMEM266Q2M3C6 531 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 CCDC12Q8WUD4 166 aaPredicted RBP12.54□□□□□ -0.4
GAREM1-202ENST00000399218 CFAP45Q9UL16 551 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
GAREM1-202ENST00000399218 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
GAREM1-202ENST00000399218 MYL10Q9BUA6 226 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 TBC1D22AQ8WUA7 517 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
GAREM1-202ENST00000399218 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
GAREM1-202ENST00000399218 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 FRMPD1Q5SYB0 1578 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
GAREM1-202ENST00000399218 NFIXQ14938 502 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 ISM2Q6H9L7 571 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
GAREM1-202ENST00000399218 hCG_1642624A0A1W2PR95 340 aa12.53□□□□□ -0.4
GAREM1-202ENST00000399218 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
GAREM1-202ENST00000399218 BBOX1O75936 387 aa12.52□□□□□ -0.4
GAREM1-202ENST00000399218 MROH2AA6NES4 1674 aa12.52□□□□□ -0.4
GAREM1-202ENST00000399218 CPS1P31327 1500 aa12.52□□□□□ -0.4
GAREM1-202ENST00000399218 PI16Q6UXB8 463 aa12.52□□□□□ -0.4
GAREM1-202ENST00000399218 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.4
GAREM1-202ENST00000399218 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.4
GAREM1-202ENST00000399218 CLIP2Q9UDT6 1046 aa12.52□□□□□ -0.4
GAREM1-202ENST00000399218 SPDYE3A6NKU9 549 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 STIM1Q13586 685 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 CACNB3P54284 484 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 TTC16Q8NEE8 873 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 MYCLP12524 364 aaPredicted RBP12.52□□□□□ -0.41
GAREM1-202ENST00000399218 USP48Q86UV5 1035 aa12.52□□□□□ -0.41
GAREM1-202ENST00000399218 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 PDE8BO95263 885 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 CHMLP26374 656 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 SSFA2P28290 1259 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 SYCP1Q15431 976 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
GAREM1-202ENST00000399218 GRAPQ13588 217 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 GRAPLQ8TC17 118 aaPredicted RBP12.51□□□□□ -0.41
GAREM1-202ENST00000399218 APPBP2Q92624 585 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 LAMC1P11047 1609 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 USP17L12C9JPN9 530 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 USP17L21D6R901 530 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
GAREM1-202ENST00000399218 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 IDEP14735 1019 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 NFKBIBQ15653 356 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
GAREM1-202ENST00000399218 SERPINC1P01008 464 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 ITPK1Q13572 414 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 FRMPD2Q68DX3 1309 aaPredicted RBP12.5□□□□□ -0.41
GAREM1-202ENST00000399218 CNGA1P29973 690 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
GAREM1-202ENST00000399218 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 A0A0U1RQG5 324 aaPredicted RBP12.5□□□□□ -0.41
GAREM1-202ENST00000399218 PPP1R12BO60237 982 aaPredicted RBP12.5□□□□□ -0.41
GAREM1-202ENST00000399218 SCAF8Q9UPN6 1271 aaKnown RBP12.5□□□□□ -0.41
GAREM1-202ENST00000399218 TRAK2O60296 914 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 CELF1Q92879 486 aaKnown RBP12.5□□□□□ -0.41
GAREM1-202ENST00000399218 TRIM5Q9C035 493 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 CCDC39Q9UFE4 941 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 TFAP4Q01664 338 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 CCDC178Q5BJE1 867 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
GAREM1-202ENST00000399218 SPATA31D1Q6ZQQ2 1576 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 SLC1A4P43007 532 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 PLIN2Q99541 437 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
GAREM1-202ENST00000399218 DIXDC1Q155Q3 683 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 LRRC47Q8N1G4 583 aaKnown RBP12.49□□□□□ -0.41
GAREM1-202ENST00000399218 MMRN2Q9H8L6 949 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 HMGN5P82970 282 aaKnown RBP12.49□□□□□ -0.41
GAREM1-202ENST00000399218 CMTR1Q8N1G2 835 aaKnown RBP12.49□□□□□ -0.41
GAREM1-202ENST00000399218 CSRNP1Q96S65 589 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 SH2D4AQ9H788 454 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 USP17L3A6NCW0 530 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 USP17L4A6NCW7 530 aa12.49□□□□□ -0.41
GAREM1-202ENST00000399218 USP17L1Q7RTZ2 530 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms