RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 TNFAIP1Q13829 316 aa23.1■■□□□ 1.29
COLCA2-201ENST00000398035 RASGRF1Q13972 1273 aa23.1■■□□□ 1.29
COLCA2-201ENST00000398035 KIF1BPQ96EK5 621 aa23.1■■□□□ 1.29
COLCA2-201ENST00000398035 ZNF512BQ96KM6 892 aaPredicted RBP23.1■■□□□ 1.29
COLCA2-201ENST00000398035 A0A1B0GUL6 1792 aa23.1■■□□□ 1.29
COLCA2-201ENST00000398035 PSME4Q14997 1843 aa23.1■■□□□ 1.29
COLCA2-201ENST00000398035 ARID4AP29374 1257 aaPredicted RBP23.09■■□□□ 1.29
COLCA2-201ENST00000398035 SAPCD2Q86UD0 394 aa23.09■■□□□ 1.29
COLCA2-201ENST00000398035 SLF2Q8IX21 1173 aa23.09■■□□□ 1.29
COLCA2-201ENST00000398035 RHPN1Q8TCX5 695 aa23.09■■□□□ 1.29
COLCA2-201ENST00000398035 CDCA5Q96FF9 252 aa23.09■■□□□ 1.29
COLCA2-201ENST00000398035 ZDHHC15Q96MV8 337 aa23.09■■□□□ 1.29
COLCA2-201ENST00000398035 GBA2Q9HCG7 927 aaPredicted RBP23.09■■□□□ 1.29
COLCA2-201ENST00000398035 AAMPQ13685 434 aa23.08■■□□□ 1.29
COLCA2-201ENST00000398035 CLASRPQ8N2M8 674 aaKnown RBP23.08■■□□□ 1.29
COLCA2-201ENST00000398035 JMYQ8N9B5 988 aa23.08■■□□□ 1.29
COLCA2-201ENST00000398035 SPATA5Q8NB90 893 aa23.08■■□□□ 1.29
COLCA2-201ENST00000398035 MKRN1Q9UHC7 482 aaKnown RBP23.08■■□□□ 1.29
COLCA2-201ENST00000398035 CNTNAP1P78357 1384 aa23.08■■□□□ 1.29
COLCA2-201ENST00000398035 IGSF3O75054 1194 aa23.08■■□□□ 1.28
COLCA2-201ENST00000398035 ECE1P42892 770 aa23.08■■□□□ 1.28
COLCA2-201ENST00000398035 GRIK5Q16478 980 aa23.08■■□□□ 1.28
COLCA2-201ENST00000398035 TTC39AQ5SRH9 613 aa23.08■■□□□ 1.28
COLCA2-201ENST00000398035 DEFB129Q9H1M3 183 aa23.08■■□□□ 1.28
COLCA2-201ENST00000398035 SPDYE2Q495Y8 402 aa23.07■■□□□ 1.28
COLCA2-201ENST00000398035 EAF2Q96CJ1 260 aaPredicted RBP23.07■■□□□ 1.28
COLCA2-201ENST00000398035 DBNDD2Q9BQY9 259 aa23.07■■□□□ 1.28
COLCA2-201ENST00000398035 HMG20BQ9P0W2 317 aa23.07■■□□□ 1.28
COLCA2-201ENST00000398035 ABCF2Q9UG63 623 aa23.07■■□□□ 1.28
COLCA2-201ENST00000398035 PRDX5P30044 214 aa23.06■■□□□ 1.28
COLCA2-201ENST00000398035 TNNI2P48788 182 aa23.06■■□□□ 1.28
COLCA2-201ENST00000398035 VEZTQ9HBM0 779 aa23.06■■□□□ 1.28
COLCA2-201ENST00000398035 ZNF70Q9UC06 446 aaPredicted RBP23.06■■□□□ 1.28
COLCA2-201ENST00000398035 CLRN2A0PK11 232 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 SUPT20HL1Q3ZLR7 823 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 DLK2Q6UY11 383 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 AACSQ86V21 672 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 CCDC8Q9H0W5 538 aaPredicted RBP23.05■■□□□ 1.28
COLCA2-201ENST00000398035 TDRD3Q9H7E2 651 aaKnown RBP23.05■■□□□ 1.28
COLCA2-201ENST00000398035 TMOD2Q9NZR1 351 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 PCDHAC2Q9Y5I4 1007 aa23.05■■□□□ 1.28
COLCA2-201ENST00000398035 HUNKP57058 714 aa23.04■■□□□ 1.28
COLCA2-201ENST00000398035 FKBP1CQ5VVH2 108 aa23.04■■□□□ 1.28
COLCA2-201ENST00000398035 APOBEC3HQ6NTF7 200 aaKnown RBP23.04■■□□□ 1.28
COLCA2-201ENST00000398035 DBNLQ9UJU6 430 aaKnown RBP23.04■■□□□ 1.28
COLCA2-201ENST00000398035 COL1A1P02452 1464 aaPredicted RBP23.03■■□□□ 1.28
COLCA2-201ENST00000398035 VEGFBP49765 207 aa23.03■■□□□ 1.28
COLCA2-201ENST00000398035 DZIP1Q86YF9 867 aaKnown RBP23.03■■□□□ 1.28
COLCA2-201ENST00000398035 FAM163AQ96GL9 167 aaPredicted RBP23.03■■□□□ 1.28
COLCA2-201ENST00000398035 IFIT2P09913 472 aaKnown RBP23.02■■□□□ 1.28
COLCA2-201ENST00000398035 MCAMP43121 646 aa23.02■■□□□ 1.28
COLCA2-201ENST00000398035 GSTO1P78417 241 aa23.02■■□□□ 1.28
COLCA2-201ENST00000398035 PAXIP1Q6ZW49 1069 aaPredicted RBP23.02■■□□□ 1.28
COLCA2-201ENST00000398035 LDHCP07864 332 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 RASA3Q14644 834 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 CCDC102AQ96A19 550 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 LRRCC1Q9C099 1032 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 DCTPP1Q9H773 170 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 IL1RAPL2Q9NP60 686 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 LRP2BPQ9P2M1 347 aa23.01■■□□□ 1.27
COLCA2-201ENST00000398035 SCAF8Q9UPN6 1271 aaKnown RBP23.01■■□□□ 1.27
COLCA2-201ENST00000398035 WDR33Q9C0J8 1336 aaKnown RBP23.01■■□□□ 1.27
COLCA2-201ENST00000398035 APBB1O00213 710 aa23■■□□□ 1.27
COLCA2-201ENST00000398035 PPP1R12BO60237 982 aaPredicted RBP23■■□□□ 1.27
COLCA2-201ENST00000398035 PRAMEF18Q5VWM3 479 aa23■■□□□ 1.27
COLCA2-201ENST00000398035 ARMC9Q7Z3E5 817 aa23■■□□□ 1.27
COLCA2-201ENST00000398035 CAPNS2Q96L46 248 aa23■■□□□ 1.27
COLCA2-201ENST00000398035 MAP2K2P36507 400 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 DIXDC1Q155Q3 683 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 RGMBQ6NW40 437 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 FAM83AQ86UY5 434 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 CRBNQ96SW2 442 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 DAGLAQ9Y4D2 1042 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 UNCXA6NJT0 531 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 TTLL12Q14166 644 aaPredicted RBP22.99■■□□□ 1.27
COLCA2-201ENST00000398035 HOOK2Q96ED9 719 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 RAI14Q9P0K7 980 aa22.99■■□□□ 1.27
COLCA2-201ENST00000398035 ZNF646O15015 1829 aaPredicted RBP22.98■■□□□ 1.27
COLCA2-201ENST00000398035 TCP10L2B9ZVM9 353 aa22.98■■□□□ 1.27
COLCA2-201ENST00000398035 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
COLCA2-201ENST00000398035 MECOMQ03112 1051 aa22.98■■□□□ 1.27
COLCA2-201ENST00000398035 TMED8Q6PL24 325 aaPredicted RBP22.98■■□□□ 1.27
COLCA2-201ENST00000398035 PI16Q6UXB8 463 aa22.98■■□□□ 1.27
COLCA2-201ENST00000398035 TLR7Q9NYK1 1049 aaKnown RBP22.98■■□□□ 1.27
COLCA2-201ENST00000398035 PCDHB15Q9Y5E8 787 aa22.98■■□□□ 1.27
COLCA2-201ENST00000398035 GAKO14976 1311 aa22.97■■□□□ 1.27
COLCA2-201ENST00000398035 MAP2K1Q02750 393 aaPredicted RBP22.97■■□□□ 1.27
COLCA2-201ENST00000398035 CYP4F22Q6NT55 531 aa22.97■■□□□ 1.27
COLCA2-201ENST00000398035 TBC1D9Q6ZT07 1266 aa22.97■■□□□ 1.27
COLCA2-201ENST00000398035 NSUN4Q96CB9 384 aaKnown RBP22.97■■□□□ 1.27
COLCA2-201ENST00000398035 SNRKQ9NRH2 765 aa22.97■■□□□ 1.27
COLCA2-201ENST00000398035 USP40Q9NVE5 1235 aa22.97■■□□□ 1.27
COLCA2-201ENST00000398035 CEP350Q5VT06 3117 aa22.96■■□□□ 1.27
COLCA2-201ENST00000398035 ZNF157P51786 506 aaPredicted RBP22.96■■□□□ 1.27
COLCA2-201ENST00000398035 NOGQ13253 232 aa22.96■■□□□ 1.27
COLCA2-201ENST00000398035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.96■■□□□ 1.27
COLCA2-201ENST00000398035 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
COLCA2-201ENST00000398035 AOX1Q06278 1338 aa22.95■■□□□ 1.27
COLCA2-201ENST00000398035 CYP2E1P05181 493 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms