RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 IFIT1P09914 478 aaKnown RBP17.89■□□□□ 0.45
SNRNP25-203ENST00000397876 TNNI2P48788 182 aa17.89■□□□□ 0.45
SNRNP25-203ENST00000397876 PUM3Q15397 648 aaKnown RBP17.89■□□□□ 0.45
SNRNP25-203ENST00000397876 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
SNRNP25-203ENST00000397876 KIF16BQ96L93 1317 aa17.89■□□□□ 0.45
SNRNP25-203ENST00000397876 LAMB1P07942 1786 aa17.89■□□□□ 0.45
SNRNP25-203ENST00000397876 ANKRD13AQ8IZ07 590 aa17.88■□□□□ 0.45
SNRNP25-203ENST00000397876 FKTNO75072 461 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 USP2O75604 605 aaPredicted RBP17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 SOX10P56693 466 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 HDLBPQ00341 1268 aaKnown RBP17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 IFNL1Q8IU54 200 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 TEKT1Q969V4 418 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 HPS5Q9UPZ3 1129 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 OTOFQ9HC10 1997 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 MAST3O60307 1309 aa17.87■□□□□ 0.45
SNRNP25-203ENST00000397876 TCP10L2B9ZVM9 353 aa17.86■□□□□ 0.45
SNRNP25-203ENST00000397876 EYA2O00167 538 aa17.86■□□□□ 0.45
SNRNP25-203ENST00000397876 UBTFL1P0CB47 393 aaPredicted RBP17.86■□□□□ 0.45
SNRNP25-203ENST00000397876 SLC5A1P13866 664 aa17.86■□□□□ 0.45
SNRNP25-203ENST00000397876 BCAMP50895 628 aa17.86■□□□□ 0.45
SNRNP25-203ENST00000397876 GRIK5Q16478 980 aa17.86■□□□□ 0.45
SNRNP25-203ENST00000397876 FGFR2P21802 821 aa17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 RFX5P48382 616 aaPredicted RBP17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 TRMT2AQ8IZ69 625 aaKnown RBP17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 TEPSINQ96N21 525 aa17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 TMEM39BQ9GZU3 492 aa17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 TMOD2Q9NZR1 351 aa17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
SNRNP25-203ENST00000397876 IGF2BP3O00425 579 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 OTUD7BQ6GQQ9 843 aa17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 FBXO46Q6PJ61 603 aaPredicted RBP17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 LPIN2Q92539 896 aa17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 R3HDMLQ9H3Y0 253 aa17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 ELP3Q9H9T3 547 aa17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
SNRNP25-203ENST00000397876 GJA5P36382 358 aa17.83■□□□□ 0.44
SNRNP25-203ENST00000397876 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.44
SNRNP25-203ENST00000397876 OPTNQ96CV9 577 aa17.83■□□□□ 0.44
SNRNP25-203ENST00000397876 ZDHHC15Q96MV8 337 aa17.83■□□□□ 0.44
SNRNP25-203ENST00000397876 FBXO3Q9UK99 471 aa17.83■□□□□ 0.44
SNRNP25-203ENST00000397876 NOB1Q9ULX3 412 aaKnown RBP17.83■□□□□ 0.44
SNRNP25-203ENST00000397876 CCER2I3L3R5 266 aa17.82■□□□□ 0.44
SNRNP25-203ENST00000397876 WDR66Q8TBY9 1149 aa17.82■□□□□ 0.44
SNRNP25-203ENST00000397876 MRIQ9BWK5 157 aa17.82■□□□□ 0.44
SNRNP25-203ENST00000397876 CSADQ9Y600 493 aa17.82■□□□□ 0.44
SNRNP25-203ENST00000397876 CIAO1O76071 339 aa17.81■□□□□ 0.44
SNRNP25-203ENST00000397876 CACNB3P54284 484 aa17.81■□□□□ 0.44
SNRNP25-203ENST00000397876 ATP2B3Q16720 1220 aa17.81■□□□□ 0.44
SNRNP25-203ENST00000397876 ATG9AQ7Z3C6 839 aa17.81■□□□□ 0.44
SNRNP25-203ENST00000397876 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
SNRNP25-203ENST00000397876 SIL1Q9H173 461 aa17.81■□□□□ 0.44
SNRNP25-203ENST00000397876 TESPA1A2RU30 521 aaPredicted RBP17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 VGLL4Q14135 290 aa17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 FKBP1CQ5VVH2 108 aa17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 FAM83AQ86UY5 434 aa17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.441e-9■■■■■ 42.5
SNRNP25-203ENST00000397876 CEP126Q9P2H0 1117 aa17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
SNRNP25-203ENST00000397876 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
SNRNP25-203ENST00000397876 CRHR2Q13324 411 aa17.79■□□□□ 0.44
SNRNP25-203ENST00000397876 APOBEC3HQ6NTF7 200 aaKnown RBP17.79■□□□□ 0.44
SNRNP25-203ENST00000397876 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
SNRNP25-203ENST00000397876 GNL3LQ9NVN8 582 aaKnown RBP17.79■□□□□ 0.44
SNRNP25-203ENST00000397876 TRIM17Q9Y577 477 aa17.79■□□□□ 0.44
SNRNP25-203ENST00000397876 IL15P40933 162 aaPredicted RBP17.78■□□□□ 0.44
SNRNP25-203ENST00000397876 CCL15-CCL14A0A0B4J2E2 113 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 GTF2A2P52657 109 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 RARSP54136 660 aaKnown RBP17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 CCL15Q16663 113 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 DCAF15Q66K64 600 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 OTOP1Q7RTM1 612 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 CNKSR2Q8WXI2 1034 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 WRNIP1Q96S55 665 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 MEIS3Q99687 375 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 PTPN18Q99952 460 aa17.77■□□□□ 0.44
SNRNP25-203ENST00000397876 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
SNRNP25-203ENST00000397876 SEMA3EO15041 775 aa17.76■□□□□ 0.43
SNRNP25-203ENST00000397876 BRI3BPQ8WY22 251 aa17.76■□□□□ 0.43
SNRNP25-203ENST00000397876 PA2G4Q9UQ80 394 aaKnown RBP17.76■□□□□ 0.43
SNRNP25-203ENST00000397876 PDE4DIPQ5VU43 2346 aa17.76■□□□□ 0.43
SNRNP25-203ENST00000397876 LDHBP07195 334 aaKnown RBP17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 CD99L2Q8TCZ2 262 aa17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 ARHGAP45Q92619 1136 aa17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 COPRSQ9NQ92 184 aa17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 DENND2AQ9ULE3 1009 aa17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 DAGLAQ9Y4D2 1042 aa17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 SNCAIPQ9Y6H5 919 aa17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 TNRC18O15417 2968 aaPredicted RBP17.75■□□□□ 0.43
SNRNP25-203ENST00000397876 SALL1Q9NSC2 1324 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 WDHD1O75717 1129 aaPredicted RBP17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 GNAI3P08754 354 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms