RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RIMBP2O15034 1052 aa23.35■■□□□ 1.33
PDLIM2-205ENST00000397761 U3KPZ7 1027 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-205ENST00000397761 PRDX5P30044 214 aa23.34■■□□□ 1.33
PDLIM2-205ENST00000397761 KIAA2012Q0VF49 1180 aa23.34■■□□□ 1.33
PDLIM2-205ENST00000397761 VPS53Q5VIR6 699 aa23.34■■□□□ 1.33
PDLIM2-205ENST00000397761 TBC1D22AQ8WUA7 517 aa23.34■■□□□ 1.33
PDLIM2-205ENST00000397761 ZNF219Q9P2Y4 722 aaPredicted RBP23.34■■□□□ 1.33
PDLIM2-205ENST00000397761 MECOMQ03112 1051 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 TSGA10IPQ3SY00 556 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 PODNQ7Z5L7 613 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 ADGRA1Q86SQ6 560 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 RASEFQ8IZ41 740 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 IL27Q8NEV9 243 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 STRBPQ96SI9 672 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 SNX14Q9Y5W7 946 aa23.33■■□□□ 1.33
PDLIM2-205ENST00000397761 CYP7A1P22680 504 aa23.32■■□□□ 1.32
PDLIM2-205ENST00000397761 CREB3L3Q68CJ9 461 aa23.32■■□□□ 1.32
PDLIM2-205ENST00000397761 NAA16Q6N069 864 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-205ENST00000397761 SNX21Q969T3 373 aa23.32■■□□□ 1.32
PDLIM2-205ENST00000397761 SLC27A2O14975 620 aa23.31■■□□□ 1.32
PDLIM2-205ENST00000397761 AIDAQ96BJ3 306 aa23.31■■□□□ 1.32
PDLIM2-205ENST00000397761 VPS33BQ9H267 617 aa23.31■■□□□ 1.32
PDLIM2-205ENST00000397761 JAG2Q9Y219 1238 aa23.31■■□□□ 1.32
PDLIM2-205ENST00000397761 BAZ2AQ9UIF9 1905 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-205ENST00000397761 FOCADQ5VW36 1801 aa23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 LDHBP07195 334 aaKnown RBP23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 RNF20Q5VTR2 975 aa23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 FHDC1Q9C0D6 1143 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 SUGT1Q9Y2Z0 365 aa23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 ZMYM6O95789 1325 aa23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 MBD4O95243 580 aa23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 DOK7Q18PE1 504 aa23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 RIOK1Q9BRS2 568 aaKnown RBP23.3■■□□□ 1.32
PDLIM2-205ENST00000397761 RPAP1Q9BWH6 1393 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-205ENST00000397761 ALX1Q15699 326 aa23.29■■□□□ 1.32
PDLIM2-205ENST00000397761 GRIK5Q16478 980 aa23.29■■□□□ 1.32
PDLIM2-205ENST00000397761 MFSD14BQ5SR56 506 aa23.29■■□□□ 1.32
PDLIM2-205ENST00000397761 TM6SF1Q9BZW5 370 aa23.29■■□□□ 1.32
PDLIM2-205ENST00000397761 COL4A5P29400 1685 aa23.28■■□□□ 1.32
PDLIM2-205ENST00000397761 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
PDLIM2-205ENST00000397761 GNAT2P19087 354 aa23.28■■□□□ 1.32
PDLIM2-205ENST00000397761 FKBP1AP62942 108 aaKnown RBP23.28■■□□□ 1.32
PDLIM2-205ENST00000397761 GTF2IP78347 998 aa23.28■■□□□ 1.32
PDLIM2-205ENST00000397761 DZIP1Q86YF9 867 aaKnown RBP23.28■■□□□ 1.32
PDLIM2-205ENST00000397761 LAMB1P07942 1786 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 ECE2O60344 883 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 GSTO1P78417 241 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 AOC3Q16853 763 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 LCORLQ8N3X6 602 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 SYT17Q9BSW7 474 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 ARMT1Q9H993 441 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 DBNDD1Q9H9R9 158 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 CTNNA3Q9UI47 895 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 ECM29Q5VYK3 1845 aa23.27■■□□□ 1.32
PDLIM2-205ENST00000397761 TIAM2Q8IVF5 1701 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 MAGEB6P1A0A0J9YX57 407 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 FGAP02671 866 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 CYP21A2P08686 494 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 BECN1Q14457 450 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 TTLL5Q6EMB2 1281 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 FAM163AQ96GL9 167 aaPredicted RBP23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 TBC1D2Q9BYX2 928 aa23.26■■□□□ 1.31
PDLIM2-205ENST00000397761 PATL2C9JE40 543 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 G3V3G9 751 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 PPIP5K2O43314 1243 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 DCAF8Q5TAQ9 597 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 STRIP1Q5VSL9 837 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 CERS5Q8N5B7 392 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 MIGA1Q8NAN2 632 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 NLGN2Q8NFZ4 835 aa23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 DICER1Q9UPY3 1922 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-205ENST00000397761 GSG1L2A8MUP6 293 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 LDHCP07864 332 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 KLHL34Q8N239 644 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 TAF6LQ9Y6J9 622 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 NAV1Q8NEY1 1877 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 CD2BP2O95400 341 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 PPP4CP60510 307 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 KRT32Q14532 448 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 ADCK5Q3MIX3 580 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 ZSWIM6Q9HCJ5 1215 aa23.24■■□□□ 1.31
PDLIM2-205ENST00000397761 ADAMTSL1Q8N6G6 1762 aa23.23■■□□□ 1.31
PDLIM2-205ENST00000397761 MROH7-TTC4A0A0A0MT08 1334 aa23.23■■□□□ 1.31
PDLIM2-205ENST00000397761 GAKO14976 1311 aa23.23■■□□□ 1.31
PDLIM2-205ENST00000397761 DACT2Q5SW24 774 aa23.23■■□□□ 1.31
PDLIM2-205ENST00000397761 EPB41L4AQ9HCS5 686 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-205ENST00000397761 DDX60LQ5H9U9 1706 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 ST18O60284 1047 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 SBF1O95248 1867 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 NEK4P51957 841 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 CERS3Q8IU89 383 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 SLF2Q8IX21 1173 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 IFNL3Q8IZI9 196 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 KCNQ5Q9NR82 932 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 SLC4A4Q9Y6R1 1079 aa23.22■■□□□ 1.31
PDLIM2-205ENST00000397761 USP17L3A6NCW0 530 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 USP17L4A6NCW7 530 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 YDJCA8MPS7 323 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms