RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 CCDC8Q9H0W5 538 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-206ENST00000397021 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
MCF2L-206ENST00000397021 DENND2AQ9ULE3 1009 aa11.93□□□□□ -0.5
MCF2L-206ENST00000397021 FPGT-TNNI3KV9GXZ4 949 aa11.93□□□□□ -0.5
MCF2L-206ENST00000397021 WDR33Q9C0J8 1336 aaKnown RBP11.92□□□□□ -0.5
MCF2L-206ENST00000397021 MYO1BO43795 1136 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 CACNB3P54284 484 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 APOBEC3FQ8IUX4 373 aaKnown RBP11.92□□□□□ -0.5
MCF2L-206ENST00000397021 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-206ENST00000397021 TEKT1Q969V4 418 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 EAF2Q96CJ1 260 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-206ENST00000397021 CAPNS2Q96L46 248 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
MCF2L-206ENST00000397021 HMG20BQ9P0W2 317 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-206ENST00000397021 FZD1Q9UP38 647 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 PSME4Q14997 1843 aa11.92□□□□□ -0.5
MCF2L-206ENST00000397021 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 SEMA3EO15041 775 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 AOC2O75106 756 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
MCF2L-206ENST00000397021 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-206ENST00000397021 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 TBC1D9Q6ZT07 1266 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 DEFB129Q9H1M3 183 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 CHMP4BQ9H444 224 aaKnown RBP11.91□□□□□ -0.5
MCF2L-206ENST00000397021 IL1RAPL2Q9NP60 686 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-206ENST00000397021 ABCF2Q9UG63 623 aa11.91□□□□□ -0.5
MCF2L-206ENST00000397021 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 HMMRO75330 724 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 MCAMP43121 646 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 RASA3Q14644 834 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
MCF2L-206ENST00000397021 CDAN1Q8IWY9 1227 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 SPATA5Q8NB90 893 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
MCF2L-206ENST00000397021 SUGT1Q9Y2Z0 365 aa11.9□□□□□ -0.5
MCF2L-206ENST00000397021 MAST3O60307 1309 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
MCF2L-206ENST00000397021 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
MCF2L-206ENST00000397021 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-206ENST00000397021 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
MCF2L-206ENST00000397021 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-206ENST00000397021 AACSQ86V21 672 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 ERC1Q8IUD2 1116 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 RHPN1Q8TCX5 695 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 ZDHHC15Q96MV8 337 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 DAGLAQ9Y4D2 1042 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 CEP350Q5VT06 3117 aa11.89□□□□□ -0.51
MCF2L-206ENST00000397021 SALL1Q9NSC2 1324 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 NF2P35240 595 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 ECE1P42892 770 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 ZNF157P51786 506 aaPredicted RBP11.88□□□□□ -0.51
MCF2L-206ENST00000397021 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 RGMBQ6NW40 437 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 HHIPL2Q6UWX4 724 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
MCF2L-206ENST00000397021 TMEM39BQ9GZU3 492 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 NDUFB9Q9Y6M9 179 aa11.88□□□□□ -0.51
MCF2L-206ENST00000397021 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-206ENST00000397021 MECOMQ03112 1051 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 ZGPATQ8N5A5 531 aaKnown RBP11.87□□□□□ -0.51
MCF2L-206ENST00000397021 HHIPL1Q96JK4 782 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 MRIQ9BWK5 157 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 USP40Q9NVE5 1235 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 ANGEL1Q9UNK9 670 aaKnown RBP11.87□□□□□ -0.51
MCF2L-206ENST00000397021 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
MCF2L-206ENST00000397021 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
MCF2L-206ENST00000397021 ZAP70P43403 619 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 TCP10Q12799 353 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 NFIAQ12857 509 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
MCF2L-206ENST00000397021 SPTY2D1Q68D10 685 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-206ENST00000397021 ZNF384Q8TF68 577 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 PPP2R3BQ9Y5P8 575 aa11.86□□□□□ -0.51
MCF2L-206ENST00000397021 SSC5DA1L4H1 1573 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 FAM155AB1AL88 458 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-206ENST00000397021 ZBTB22O15209 634 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-206ENST00000397021 IFIT2P09913 472 aaKnown RBP11.85□□□□□ -0.51
MCF2L-206ENST00000397021 BTDP43251 543 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 TNNI2P48788 182 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 FKBP1BP68106 108 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms