RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 RIOK1Q9BRS2 568 aaKnown RBP12.98□□□□□ -0.33
NUP98-205ENST00000397007 PRDX5P30044 214 aa12.98□□□□□ -0.33
NUP98-205ENST00000397007 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
NUP98-205ENST00000397007 GTF2IP78347 998 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 METTL16Q86W50 562 aaKnown RBP12.97□□□□□ -0.33
NUP98-205ENST00000397007 LNPKQ9C0E8 428 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 RAD17O75943 681 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
NUP98-205ENST00000397007 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
NUP98-205ENST00000397007 ADD2P35612 726 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
NUP98-205ENST00000397007 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
NUP98-205ENST00000397007 MROH7-TTC4A0A0A0MT08 1334 aa12.96□□□□□ -0.33
NUP98-205ENST00000397007 MECOMQ03112 1051 aa12.96□□□□□ -0.33
NUP98-205ENST00000397007 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
NUP98-205ENST00000397007 KCNJ4P48050 445 aa12.96□□□□□ -0.34
NUP98-205ENST00000397007 CCDC158Q5M9N0 1113 aa12.96□□□□□ -0.34
NUP98-205ENST00000397007 B4GALNT3Q6L9W6 998 aa12.96□□□□□ -0.34
NUP98-205ENST00000397007 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.34
NUP98-205ENST00000397007 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.34
NUP98-205ENST00000397007 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.34
NUP98-205ENST00000397007 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.34
NUP98-205ENST00000397007 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
NUP98-205ENST00000397007 CHGBP05060 677 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 EDC3Q96F86 508 aaKnown RBP12.95□□□□□ -0.34
NUP98-205ENST00000397007 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 NDUFB9Q9Y6M9 179 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 RLFQ13129 1914 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 IFIT2P09913 472 aaKnown RBP12.95□□□□□ -0.34
NUP98-205ENST00000397007 EIF6P56537 245 aaKnown RBP12.95□□□□□ -0.34
NUP98-205ENST00000397007 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 SKAP1Q86WV1 359 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 ZGPATQ8N5A5 531 aaKnown RBP12.95□□□□□ -0.34
NUP98-205ENST00000397007 ROBO3Q96MS0 1386 aa12.95□□□□□ -0.34
NUP98-205ENST00000397007 EPS15P42566 896 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 TEPSINQ96N21 525 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 IDI2Q9BXS1 227 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 MYOZ2Q9NPC6 264 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 ADARB2Q9NS39 739 aaKnown RBP12.94□□□□□ -0.34
NUP98-205ENST00000397007 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
NUP98-205ENST00000397007 ZMYM6O95789 1325 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 TTC39AQ5SRH9 613 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 ZC3H15Q8WU90 426 aaKnown RBP12.94□□□□□ -0.34
NUP98-205ENST00000397007 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 IL25Q9H293 177 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 WNT10BO00744 389 aa12.94□□□□□ -0.34
NUP98-205ENST00000397007 TTF1Q15361 905 aaPredicted RBP12.93□□□□□ -0.34
NUP98-205ENST00000397007 OS9Q13438 667 aaPredicted RBP12.93□□□□□ -0.34
NUP98-205ENST00000397007 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
NUP98-205ENST00000397007 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
NUP98-205ENST00000397007 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
NUP98-205ENST00000397007 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
NUP98-205ENST00000397007 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
NUP98-205ENST00000397007 IL17RAQ96F46 866 aa12.93□□□□□ -0.34
NUP98-205ENST00000397007 MAST3O60307 1309 aa12.93□□□□□ -0.34
NUP98-205ENST00000397007 CRKP46108 304 aa12.92□□□□□ -0.34
NUP98-205ENST00000397007 ZNF784Q8NCA9 323 aaPredicted RBP12.92□□□□□ -0.34
NUP98-205ENST00000397007 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
NUP98-205ENST00000397007 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
NUP98-205ENST00000397007 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
NUP98-205ENST00000397007 PDE6AP16499 860 aa12.92□□□□□ -0.34
NUP98-205ENST00000397007 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
NUP98-205ENST00000397007 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
NUP98-205ENST00000397007 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
NUP98-205ENST00000397007 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
NUP98-205ENST00000397007 BOLA2Q9H3K6 86 aa12.91□□□□□ -0.34
NUP98-205ENST00000397007 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
NUP98-205ENST00000397007 SDSP20132 328 aa12.91□□□□□ -0.34
NUP98-205ENST00000397007 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
NUP98-205ENST00000397007 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
NUP98-205ENST00000397007 ERC2O15083 957 aa12.91□□□□□ -0.34
NUP98-205ENST00000397007 EPHX2P34913 555 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.34
NUP98-205ENST00000397007 CCDC136Q96JN2 1154 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 SH3BP5LQ7L8J4 393 aa12.9□□□□□ -0.34
NUP98-205ENST00000397007 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.35
NUP98-205ENST00000397007 NBPF9Q3BBW0 867 aa12.9□□□□□ -0.35
NUP98-205ENST00000397007 OSBP2Q969R2 916 aa12.9□□□□□ -0.35
NUP98-205ENST00000397007 APBB1O00213 710 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 GOLIM4O00461 696 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 DIXDC1Q155Q3 683 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
NUP98-205ENST00000397007 MYH4Q9Y623 1939 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms