RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 BPIFA3Q9BQP9 254 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 INTS13Q9NVM9 706 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 FHOD1Q9Y613 1164 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 SPTLC2O15270 562 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 A1BGP04217 495 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
NUP98-204ENST00000397004 CDC27P30260 824 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
NUP98-204ENST00000397004 EPC1Q9H2F5 836 aa16.19■□□□□ 0.18
NUP98-204ENST00000397004 RXRAP19793 462 aa16.19■□□□□ 0.18
NUP98-204ENST00000397004 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
NUP98-204ENST00000397004 SHC4Q6S5L8 630 aa16.19■□□□□ 0.18
NUP98-204ENST00000397004 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
NUP98-204ENST00000397004 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
NUP98-204ENST00000397004 EYA2O00167 538 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 PRC1O43663 620 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 GABPB1Q06547 395 aaPredicted RBP16.18■□□□□ 0.18
NUP98-204ENST00000397004 C8orf76Q96K31 380 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 IMPACTQ9P2X3 320 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
NUP98-204ENST00000397004 ZBTB22O15209 634 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 NLRP12P59046 1061 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 STK38Q15208 465 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 TMEM139Q8IV31 216 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 TMX1Q9H3N1 280 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 INCENPQ9NQS7 918 aa16.18■□□□□ 0.18
NUP98-204ENST00000397004 FOXN1O15353 648 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 CLCN6P51797 869 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 PDE4BQ07343 736 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 ZNF771Q7L3S4 317 aaPredicted RBP16.17■□□□□ 0.18
NUP98-204ENST00000397004 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
NUP98-204ENST00000397004 ZBTB3Q9H5J0 574 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 GPR108Q9NPR9 543 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
NUP98-204ENST00000397004 FANCCQ00597 558 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 PTPAQ15257 358 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 KRT222Q8N1A0 295 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 HPSEQ9Y251 543 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 YEATS4O95619 227 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 GSDMDP57764 484 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 PNOCQ13519 176 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
NUP98-204ENST00000397004 CYB5R4Q7L1T6 521 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 REXO1L1PQ8IX06 675 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 DCAF5Q96JK2 942 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
NUP98-204ENST00000397004 IL15P40933 162 aaPredicted RBP16.16■□□□□ 0.18
NUP98-204ENST00000397004 ZAP70P43403 619 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 TTC5Q8N0Z6 440 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
NUP98-204ENST00000397004 TUBE1Q9UJT0 475 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 TACC3Q9Y6A5 838 aa16.16■□□□□ 0.18
NUP98-204ENST00000397004 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
NUP98-204ENST00000397004 PLA2G4AP47712 749 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 NAT10Q9H0A0 1025 aaKnown RBP16.15■□□□□ 0.18
NUP98-204ENST00000397004 ECM29Q5VYK3 1845 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
NUP98-204ENST00000397004 CMA1P23946 247 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 METTL16Q86W50 562 aaKnown RBP16.15■□□□□ 0.18
NUP98-204ENST00000397004 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 MED15Q96RN5 788 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 PHKBQ93100 1093 aa16.15■□□□□ 0.18
NUP98-204ENST00000397004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.183e-9■□□□□ 10.6
NUP98-204ENST00000397004 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.18
NUP98-204ENST00000397004 GRIN1Q05586 938 aa16.14■□□□□ 0.18
NUP98-204ENST00000397004 SLC39A14Q15043 492 aa16.14■□□□□ 0.18
NUP98-204ENST00000397004 XAGE2Q96GT9 111 aa16.14■□□□□ 0.18
NUP98-204ENST00000397004 LAMB4A4D0S4 1761 aa16.14■□□□□ 0.18
NUP98-204ENST00000397004 FAM217BQ9NTX9 383 aaPredicted RBP16.14■□□□□ 0.17
NUP98-204ENST00000397004 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
NUP98-204ENST00000397004 ZRANB2O95218 330 aaKnown RBP eCLIP16.14■□□□□ 0.172e-8■■□□□ 12.4
NUP98-204ENST00000397004 LONRF3Q496Y0 759 aa16.14■□□□□ 0.17
NUP98-204ENST00000397004 GORABQ5T7V8 394 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 DNAI1Q9UI46 699 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 RANBP6O60518 1105 aaKnown RBP16.13■□□□□ 0.17
NUP98-204ENST00000397004 SPECC1Q5M775 1068 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 AKAP11Q9UKA4 1901 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 WASHC4Q2M389 1173 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 FANCLQ9NW38 375 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.178e-7■■■□□ 17.1
NUP98-204ENST00000397004 PARP3Q9Y6F1 533 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 VWA3AA6NCI4 1184 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 CABP4P57796 275 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 ETF1P62495 437 aaKnown RBP16.13■□□□□ 0.17
NUP98-204ENST00000397004 ARHGAP29Q52LW3 1261 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 VPS37DQ86XT2 251 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 CCDC150Q8NCX0 1101 aa16.13■□□□□ 0.17
NUP98-204ENST00000397004 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms