RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 VPS33BQ9H267 617 aa16.99■□□□□ 0.31
GAPDH-203ENST00000396858 DACT2Q5SW24 774 aa16.98■□□□□ 0.31
GAPDH-203ENST00000396858 SPTY2D1Q68D10 685 aaPredicted RBP16.98■□□□□ 0.31
GAPDH-203ENST00000396858 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
GAPDH-203ENST00000396858 ADGRA1Q86SQ6 560 aa16.98■□□□□ 0.31
GAPDH-203ENST00000396858 OSBP2Q969R2 916 aa16.98■□□□□ 0.31
GAPDH-203ENST00000396858 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 F8W031 263 aaPredicted RBP16.97■□□□□ 0.31
GAPDH-203ENST00000396858 RAD17O75943 681 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 CYP7A1P22680 504 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 UBE3CQ15386 1083 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 NAA16Q6N069 864 aaPredicted RBP16.97■□□□□ 0.31
GAPDH-203ENST00000396858 USP17L1Q7RTZ2 530 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 NSUN4Q96CB9 384 aaKnown RBP16.97■□□□□ 0.31
GAPDH-203ENST00000396858 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 ZNRF3Q9ULT6 936 aa16.97■□□□□ 0.31
GAPDH-203ENST00000396858 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
GAPDH-203ENST00000396858 TICAM2Q86XR7 235 aa16.96■□□□□ 0.31
GAPDH-203ENST00000396858 MIGA1Q8NAN2 632 aa16.96■□□□□ 0.31
GAPDH-203ENST00000396858 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
GAPDH-203ENST00000396858 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
GAPDH-203ENST00000396858 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
GAPDH-203ENST00000396858 PSMD14O00487 310 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 GPAA1O43292 621 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 MBD4O95243 580 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 GPR162Q16538 588 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 ZNF541Q9H0D2 1346 aa16.95■□□□□ 0.3
GAPDH-203ENST00000396858 REC8O95072 547 aa16.94■□□□□ 0.3
GAPDH-203ENST00000396858 LMNB1P20700 586 aa16.94■□□□□ 0.3
GAPDH-203ENST00000396858 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
GAPDH-203ENST00000396858 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
GAPDH-203ENST00000396858 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
GAPDH-203ENST00000396858 DICER1Q9UPY3 1922 aaKnown RBP16.94■□□□□ 0.3
GAPDH-203ENST00000396858 SBF1O95248 1867 aa16.93■□□□□ 0.3
GAPDH-203ENST00000396858 SCNN1DP51172 638 aa16.93■□□□□ 0.3
GAPDH-203ENST00000396858 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
GAPDH-203ENST00000396858 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
GAPDH-203ENST00000396858 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-203ENST00000396858 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
GAPDH-203ENST00000396858 ARMT1Q9H993 441 aa16.93■□□□□ 0.3
GAPDH-203ENST00000396858 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
GAPDH-203ENST00000396858 RNF181Q9P0P0 153 aa16.93■□□□□ 0.3
GAPDH-203ENST00000396858 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
GAPDH-203ENST00000396858 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
GAPDH-203ENST00000396858 GSTO1P78417 241 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 PTH1RQ03431 593 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 CXCL9Q07325 125 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 CIAPIN1Q6FI81 312 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 SUGT1Q9Y2Z0 365 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 GAKO14976 1311 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 MYO3BQ8WXR4 1341 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
GAPDH-203ENST00000396858 MAGEB6P1A0A0J9YX57 407 aa16.91■□□□□ 0.3
GAPDH-203ENST00000396858 FOXP2O15409 715 aa16.91■□□□□ 0.3
GAPDH-203ENST00000396858 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
GAPDH-203ENST00000396858 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
GAPDH-203ENST00000396858 AATFQ9NY61 560 aaKnown RBP eCLIP16.91■□□□□ 0.3
GAPDH-203ENST00000396858 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-203ENST00000396858 DAGLAQ9Y4D2 1042 aa16.91■□□□□ 0.3
GAPDH-203ENST00000396858 FZD9O00144 591 aa16.9■□□□□ 0.3
GAPDH-203ENST00000396858 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
GAPDH-203ENST00000396858 BTDP43251 543 aa16.9■□□□□ 0.3
GAPDH-203ENST00000396858 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
GAPDH-203ENST00000396858 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
GAPDH-203ENST00000396858 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
GAPDH-203ENST00000396858 IGSF3O75054 1194 aa16.89■□□□□ 0.29
GAPDH-203ENST00000396858 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
GAPDH-203ENST00000396858 TMED8Q6PL24 325 aaPredicted RBP16.89■□□□□ 0.29
GAPDH-203ENST00000396858 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
GAPDH-203ENST00000396858 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
GAPDH-203ENST00000396858 USP26Q9BXU7 913 aa16.89■□□□□ 0.29
GAPDH-203ENST00000396858 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.29
GAPDH-203ENST00000396858 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
GAPDH-203ENST00000396858 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
GAPDH-203ENST00000396858 PRKAB2O43741 272 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 CRKP46108 304 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 GMLQ99445 158 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
GAPDH-203ENST00000396858 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 PCDHAC2Q9Y5I4 1007 aa16.88■□□□□ 0.29
GAPDH-203ENST00000396858 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
GAPDH-203ENST00000396858 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
GAPDH-203ENST00000396858 SHTN1A0MZ66 631 aa16.87■□□□□ 0.29
GAPDH-203ENST00000396858 GRIN3BO60391 1043 aa16.87■□□□□ 0.29
GAPDH-203ENST00000396858 LDHCP07864 332 aa16.87■□□□□ 0.29
GAPDH-203ENST00000396858 HSPD1P10809 573 aaKnown RBP16.87■□□□□ 0.29
GAPDH-203ENST00000396858 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
GAPDH-203ENST00000396858 TNIP1Q15025 636 aa16.87■□□□□ 0.29
GAPDH-203ENST00000396858 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
GAPDH-203ENST00000396858 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
GAPDH-203ENST00000396858 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms