RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ZNF70Q9UC06 446 aaPredicted RBP20.48■□□□□ 0.87
CLTA-203ENST00000396603 ANKRD44Q8N8A2 993 aa20.47■□□□□ 0.87
CLTA-203ENST00000396603 CLMNQ96JQ2 1002 aa20.47■□□□□ 0.87
CLTA-203ENST00000396603 JAG2Q9Y219 1238 aa20.47■□□□□ 0.87
CLTA-203ENST00000396603 CRKP46108 304 aa20.46■□□□□ 0.87
CLTA-203ENST00000396603 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
CLTA-203ENST00000396603 METTL24Q5JXM2 366 aa20.46■□□□□ 0.87
CLTA-203ENST00000396603 FZD1Q9UP38 647 aa20.46■□□□□ 0.87
CLTA-203ENST00000396603 MAST3O60307 1309 aa20.46■□□□□ 0.87
CLTA-203ENST00000396603 TEPSINQ96N21 525 aa20.45■□□□□ 0.86
CLTA-203ENST00000396603 AOX1Q06278 1338 aa20.45■□□□□ 0.86
CLTA-203ENST00000396603 IGF2BP3O00425 579 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLTA-203ENST00000396603 FKBP1CQ5VVH2 108 aa20.44■□□□□ 0.86
CLTA-203ENST00000396603 HOOK2Q96ED9 719 aa20.44■□□□□ 0.86
CLTA-203ENST00000396603 R3HDMLQ9H3Y0 253 aa20.44■□□□□ 0.86
CLTA-203ENST00000396603 TDRD3Q9H7E2 651 aaKnown RBP20.44■□□□□ 0.86
CLTA-203ENST00000396603 FBXO3Q9UK99 471 aa20.44■□□□□ 0.86
CLTA-203ENST00000396603 IFIT1P09914 478 aaKnown RBP20.43■□□□□ 0.86
CLTA-203ENST00000396603 CT47B1P0C2W7 299 aaPredicted RBP20.43■□□□□ 0.86
CLTA-203ENST00000396603 PUM3Q15397 648 aaKnown RBP20.43■□□□□ 0.86
CLTA-203ENST00000396603 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
CLTA-203ENST00000396603 FAM83AQ86UY5 434 aa20.43■□□□□ 0.86
CLTA-203ENST00000396603 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
CLTA-203ENST00000396603 TEKT1Q969V4 418 aa20.43■□□□□ 0.86
CLTA-203ENST00000396603 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
CLTA-203ENST00000396603 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
CLTA-203ENST00000396603 FRAT2O75474 233 aaPredicted RBP20.42■□□□□ 0.86
CLTA-203ENST00000396603 SLFN5Q08AF3 891 aa20.42■□□□□ 0.86
CLTA-203ENST00000396603 INTS3Q68E01 1043 aaKnown RBP20.42■□□□□ 0.86
CLTA-203ENST00000396603 ZDHHC15Q96MV8 337 aa20.42■□□□□ 0.86
CLTA-203ENST00000396603 RPAP1Q9BWH6 1393 aaPredicted RBP20.42■□□□□ 0.86
CLTA-203ENST00000396603 ZBTB22O15209 634 aa20.41■□□□□ 0.86
CLTA-203ENST00000396603 FGFR2P21802 821 aa20.41■□□□□ 0.86
CLTA-203ENST00000396603 GJA5P36382 358 aa20.41■□□□□ 0.86
CLTA-203ENST00000396603 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.41■□□□□ 0.865e-8■□□□□ 9.7
CLTA-203ENST00000396603 OPTNQ96CV9 577 aa20.41■□□□□ 0.86
CLTA-203ENST00000396603 TMOD2Q9NZR1 351 aa20.41■□□□□ 0.86
CLTA-203ENST00000396603 MAP3K9P80192 1104 aa20.4■□□□□ 0.86
CLTA-203ENST00000396603 PRPF38BQ5VTL8 546 aaKnown RBP20.4■□□□□ 0.86
CLTA-203ENST00000396603 HHIPL2Q6UWX4 724 aa20.4■□□□□ 0.86
CLTA-203ENST00000396603 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.4■□□□□ 0.86
CLTA-203ENST00000396603 OTOP1Q7RTM1 612 aa20.4■□□□□ 0.86
CLTA-203ENST00000396603 HDAC5Q9UQL6 1122 aa20.4■□□□□ 0.86
CLTA-203ENST00000396603 CSADQ9Y600 493 aa20.4■□□□□ 0.86
CLTA-203ENST00000396603 TCP10L2B9ZVM9 353 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 EYA2O00167 538 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 GTF2A2P52657 109 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 CRHR2Q13324 411 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 LPIN2Q92539 896 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 MS4A4AQ96JQ5 239 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 TMEM39BQ9GZU3 492 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 ZCCHC17Q9NP64 241 aaKnown RBP20.39■□□□□ 0.85
CLTA-203ENST00000396603 TRIM17Q9Y577 477 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 OTOFQ9HC10 1997 aa20.39■□□□□ 0.85
CLTA-203ENST00000396603 CHAF1AQ13111 956 aaPredicted RBP20.38■□□□□ 0.85
CLTA-203ENST00000396603 VGLL4Q14135 290 aa20.38■□□□□ 0.85
CLTA-203ENST00000396603 ARHGEF6Q15052 776 aa20.38■□□□□ 0.85
CLTA-203ENST00000396603 PTPN18Q99952 460 aa20.38■□□□□ 0.85
CLTA-203ENST00000396603 ELP3Q9H9T3 547 aa20.38■□□□□ 0.85
CLTA-203ENST00000396603 SLC5A1P13866 664 aa20.37■□□□□ 0.85
CLTA-203ENST00000396603 RFX5P48382 616 aaPredicted RBP20.37■□□□□ 0.85
CLTA-203ENST00000396603 BCAMP50895 628 aa20.37■□□□□ 0.85
CLTA-203ENST00000396603 SP3Q02447 781 aa20.37■□□□□ 0.85
CLTA-203ENST00000396603 GRIK5Q16478 980 aa20.37■□□□□ 0.85
CLTA-203ENST00000396603 APOBEC3HQ6NTF7 200 aaKnown RBP20.37■□□□□ 0.85
CLTA-203ENST00000396603 IQSEC3Q9UPP2 1182 aaPredicted RBP20.37■□□□□ 0.85
CLTA-203ENST00000396603 PDE4DIPQ5VU43 2346 aa20.36■□□□□ 0.85
CLTA-203ENST00000396603 SPDYE5A6NIY4 337 aa20.36■□□□□ 0.85
CLTA-203ENST00000396603 WDHD1O75717 1129 aaPredicted RBP20.36■□□□□ 0.85
CLTA-203ENST00000396603 CIAO1O76071 339 aa20.36■□□□□ 0.85
CLTA-203ENST00000396603 TRMT2AQ8IZ69 625 aaKnown RBP20.36■□□□□ 0.85
CLTA-203ENST00000396603 PTPN22Q9Y2R2 807 aa20.36■□□□□ 0.85
CLTA-203ENST00000396603 HTTP42858 3142 aa20.36■□□□□ 0.85
CLTA-203ENST00000396603 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 ERO1BQ86YB8 467 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 CDAN1Q8IWY9 1227 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 KLHDC4Q8TBB5 520 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 EFCC1Q9HA90 598 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 ZFYVE28Q9HCC9 887 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
CLTA-203ENST00000396603 CCL15-CCL14A0A0B4J2E2 113 aa20.34■□□□□ 0.85
CLTA-203ENST00000396603 SEMA3EO15041 775 aa20.34■□□□□ 0.85
CLTA-203ENST00000396603 CCL15Q16663 113 aa20.34■□□□□ 0.85
CLTA-203ENST00000396603 BRI3BPQ8WY22 251 aa20.34■□□□□ 0.85
CLTA-203ENST00000396603 ARMC5Q96C12 935 aa20.34■□□□□ 0.85
CLTA-203ENST00000396603 UBTFL1P0CB47 393 aaPredicted RBP20.33■□□□□ 0.85
CLTA-203ENST00000396603 ATG9AQ7Z3C6 839 aa20.33■□□□□ 0.85
CLTA-203ENST00000396603 CD99L2Q8TCZ2 262 aa20.33■□□□□ 0.85
CLTA-203ENST00000396603 GNL3LQ9NVN8 582 aaKnown RBP20.33■□□□□ 0.85
CLTA-203ENST00000396603 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.33■□□□□ 0.85
CLTA-203ENST00000396603 SALL1Q9NSC2 1324 aa20.32■□□□□ 0.84
CLTA-203ENST00000396603 CETPP11597 493 aa20.32■□□□□ 0.84
CLTA-203ENST00000396603 TAF1CQ15572 869 aaPredicted RBP20.32■□□□□ 0.84
CLTA-203ENST00000396603 FAM151AQ8WW52 585 aa20.32■□□□□ 0.84
CLTA-203ENST00000396603 API5Q9BZZ5 524 aaKnown RBP20.32■□□□□ 0.84
CLTA-203ENST00000396603 PCDH10Q9P2E7 1040 aa20.32■□□□□ 0.84
CLTA-203ENST00000396603 SNCAIPQ9Y6H5 919 aa20.32■□□□□ 0.84
CLTA-203ENST00000396603 IL15P40933 162 aaPredicted RBP20.31■□□□□ 0.84
CLTA-203ENST00000396603 PPIL2Q13356 520 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms