RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 TROQ12816 1431 aaPredicted RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 MCM7P33993 719 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 RFC1P35251 1148 aaPredicted RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 C8orf74Q6P047 294 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 RRP36Q96EU6 259 aaKnown RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 SMARCC2Q8TAQ2 1214 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 ZNF131P52739 623 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 DCAF17Q5H9S7 520 aaPredicted RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 ARID4AP29374 1257 aaPredicted RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 STX17P56962 302 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 ELP1O95163 1332 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 CYP7A1P22680 504 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 RPL13P26373 211 aaKnown RBP15.68■□□□□ 0.1
COL4A3-202ENST00000396578 ATL3Q6DD88 541 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.68■□□□□ 0.1
COL4A3-202ENST00000396578 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 IGSF3O75054 1194 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 VWA3BQ502W6 1294 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 UBL4BQ8N7F7 174 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 ITIH3Q06033 890 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 CYP26C1Q6V0L0 522 aa15.68■□□□□ 0.1
COL4A3-202ENST00000396578 PDE1AP54750 535 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 RAPGEF1Q13905 1077 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 CCT6AP40227 531 aaKnown RBP15.67■□□□□ 0.1
COL4A3-202ENST00000396578 MBIPQ9NS73 344 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 EPB41P11171 864 aaKnown RBP15.67■□□□□ 0.1
COL4A3-202ENST00000396578 ERCC3P19447 782 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 RABGAP1Q9Y3P9 1069 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 GNAT2P19087 354 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
COL4A3-202ENST00000396578 PLCB1Q9NQ66 1216 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 IQUBQ8NA54 791 aa15.67■□□□□ 0.1
COL4A3-202ENST00000396578 PPP1R2P41236 205 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 KRT5P13647 590 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 CROCCP2Q86T23 111 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 KIFC2Q96AC6 838 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 GNA11P29992 359 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 ST5P78524 1137 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 MYL5Q02045 173 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 GABPB2Q8TAK5 448 aaPredicted RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 NPHP3Q7Z494 1330 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 RUFY4Q6ZNE9 571 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 PPANQ9NQ55 473 aaKnown RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 CTNND2Q9UQB3 1225 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 SH2D4BQ5SQS7 431 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 RNF10Q8N5U6 811 aaKnown RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 TCEANC2Q96MN5 208 aa15.66■□□□□ 0.1
COL4A3-202ENST00000396578 TTF2Q9UNY4 1162 aaKnown RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 CFAP65Q6ZU64 1925 aaKnown RBP15.66■□□□□ 0.1
COL4A3-202ENST00000396578 SPOPO43791 374 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 RASA3Q14644 834 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 UTP14CQ5TAP6 766 aaKnown RBP15.65■□□□□ 0.1
COL4A3-202ENST00000396578 MAP7Q14244 749 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 GIPC1O14908 333 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 CETN3O15182 167 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 TRPC3Q13507 836 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 PDE1CQ14123 709 aaPredicted RBP15.65■□□□□ 0.1
COL4A3-202ENST00000396578 NME9Q86XW9 330 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 INTS4Q96HW7 963 aaKnown RBP15.65■□□□□ 0.1
COL4A3-202ENST00000396578 PAXIP1Q6ZW49 1069 aaPredicted RBP15.65■□□□□ 0.1
COL4A3-202ENST00000396578 GOLGA6BA6NDN3 693 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 CCDC38Q502W7 563 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 WAPLQ7Z5K2 1190 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 ARHGAP45Q92619 1136 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 FAM204AQ9H8W3 233 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 PAG1Q9NWQ8 432 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
COL4A3-202ENST00000396578 B4DLN1 442 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 MRPL12P52815 198 aaKnown RBP15.65■□□□□ 0.1
COL4A3-202ENST00000396578 RUFY3Q7L099 469 aa15.65■□□□□ 0.1
COL4A3-202ENST00000396578 I3L4J1 428 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 PPP1R21Q6ZMI0 780 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 ASXL1Q8IXJ9 1541 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 NAA16Q6N069 864 aaPredicted RBP15.64■□□□□ 0.09
COL4A3-202ENST00000396578 HAUS7Q99871 368 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 NOC4LQ9BVI4 516 aaKnown RBP15.64■□□□□ 0.09
COL4A3-202ENST00000396578 RBM28Q9NW13 759 aaKnown RBP15.64■□□□□ 0.09
COL4A3-202ENST00000396578 STK10O94804 968 aaKnown RBP15.64■□□□□ 0.09
COL4A3-202ENST00000396578 RASSF2P50749 326 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 WDR44Q5JSH3 913 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 MAGEB6P1A0A0J9YX57 407 aa15.64■□□□□ 0.09
COL4A3-202ENST00000396578 STX10O60499 249 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
COL4A3-202ENST00000396578 AK2P54819 239 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 NBPF6Q5VWK0 638 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 ANKRD13DQ6ZTN6 518 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 NBPF4Q96M43 638 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 GABPB1Q06547 395 aaPredicted RBP15.63■□□□□ 0.09
COL4A3-202ENST00000396578 AKNAD1Q5T1N1 836 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 EMILIN1Q9Y6C2 1016 aa15.63■□□□□ 0.09
COL4A3-202ENST00000396578 PSMD6Q15008 389 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms