RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SPDYE2Q495Y8 402 aa22.83■■□□□ 1.25
FXN-203ENST00000396366 CLUAP1Q96AJ1 413 aa22.83■■□□□ 1.25
FXN-203ENST00000396366 SAGE1Q9NXZ1 904 aa22.83■■□□□ 1.25
FXN-203ENST00000396366 CDAN1Q8IWY9 1227 aa22.82■■□□□ 1.24
FXN-203ENST00000396366 TBC1D22AQ8WUA7 517 aa22.82■■□□□ 1.24
FXN-203ENST00000396366 CEP126Q9P2H0 1117 aa22.82■■□□□ 1.24
FXN-203ENST00000396366 PPP2R3BQ9Y5P8 575 aa22.82■■□□□ 1.24
FXN-203ENST00000396366 TCP10L2B9ZVM9 353 aa22.81■■□□□ 1.24
FXN-203ENST00000396366 IPO8O15397 1037 aaKnown RBP22.81■■□□□ 1.24
FXN-203ENST00000396366 ATP2B3Q16720 1220 aa22.81■■□□□ 1.24
FXN-203ENST00000396366 ATF7IPQ6VMQ6 1270 aa22.81■■□□□ 1.24
FXN-203ENST00000396366 CLMNQ96JQ2 1002 aa22.81■■□□□ 1.24
FXN-203ENST00000396366 COPRSQ9NQ92 184 aa22.81■■□□□ 1.24
FXN-203ENST00000396366 FBXO3Q9UK99 471 aa22.81■■□□□ 1.24
FXN-203ENST00000396366 IL15P40933 162 aaPredicted RBP22.8■■□□□ 1.24
FXN-203ENST00000396366 SUPT20HL1Q3ZLR7 823 aa22.8■■□□□ 1.24
FXN-203ENST00000396366 HDAC5Q9UQL6 1122 aa22.8■■□□□ 1.24
FXN-203ENST00000396366 USP2O75604 605 aaPredicted RBP22.79■■□□□ 1.24
FXN-203ENST00000396366 GNAI3P08754 354 aa22.79■■□□□ 1.24
FXN-203ENST00000396366 CACNB3P54284 484 aa22.79■■□□□ 1.24
FXN-203ENST00000396366 MAP3K11Q16584 847 aa22.79■■□□□ 1.24
FXN-203ENST00000396366 REM2Q8IYK8 340 aaPredicted RBP22.79■■□□□ 1.24
FXN-203ENST00000396366 SRGAP3O43295 1099 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 PPP1R12BO60237 982 aaPredicted RBP22.78■■□□□ 1.24
FXN-203ENST00000396366 ADORA1P30542 326 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 TM4SF4P48230 202 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 HDLBPQ00341 1268 aaKnown RBP22.78■■□□□ 1.24
FXN-203ENST00000396366 SPRYD7Q5W111 196 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 TEKT1Q969V4 418 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 SLC10A4Q96EP9 437 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 TEPSINQ96N21 525 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 MCOLN1Q9GZU1 580 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 TMEM39BQ9GZU3 492 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 MYH13Q9UKX3 1938 aa22.78■■□□□ 1.24
FXN-203ENST00000396366 TBC1D8O95759 1140 aa22.77■■□□□ 1.24
FXN-203ENST00000396366 TIMM10P62072 90 aa22.77■■□□□ 1.24
FXN-203ENST00000396366 DGKZQ13574 1117 aa22.77■■□□□ 1.24
FXN-203ENST00000396366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.77■■□□□ 1.24
FXN-203ENST00000396366 PHKA1P46020 1223 aa22.76■■□□□ 1.23
FXN-203ENST00000396366 TNFAIP1Q13829 316 aa22.76■■□□□ 1.23
FXN-203ENST00000396366 APOBEC3HQ6NTF7 200 aaKnown RBP22.76■■□□□ 1.23
FXN-203ENST00000396366 TMEM57Q8N5G2 664 aa22.76■■□□□ 1.23
FXN-203ENST00000396366 MTX1Q13505 466 aa22.75■■□□□ 1.23
FXN-203ENST00000396366 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
FXN-203ENST00000396366 WDR66Q8TBY9 1149 aa22.75■■□□□ 1.23
FXN-203ENST00000396366 ZDHHC15Q96MV8 337 aa22.75■■□□□ 1.23
FXN-203ENST00000396366 MRIQ9BWK5 157 aa22.75■■□□□ 1.23
FXN-203ENST00000396366 GNAI2P04899 355 aa22.74■■□□□ 1.23
FXN-203ENST00000396366 TFCP2Q12800 502 aa22.74■■□□□ 1.23
FXN-203ENST00000396366 SUGT1Q9Y2Z0 365 aa22.74■■□□□ 1.23
FXN-203ENST00000396366 PNMA6EA0A0J9YXQ4 647 aa22.73■■□□□ 1.23
FXN-203ENST00000396366 CCDC85CA6NKD9 419 aa22.73■■□□□ 1.23
FXN-203ENST00000396366 IREB2P48200 963 aaKnown RBP22.73■■□□□ 1.23
FXN-203ENST00000396366 DIXDC1Q155Q3 683 aa22.73■■□□□ 1.23
FXN-203ENST00000396366 HHIPL2Q6UWX4 724 aa22.73■■□□□ 1.23
FXN-203ENST00000396366 WNK4Q96J92 1243 aa22.73■■□□□ 1.23
FXN-203ENST00000396366 R3HDMLQ9H3Y0 253 aa22.73■■□□□ 1.23
FXN-203ENST00000396366 PRDX5P30044 214 aa22.72■■□□□ 1.23
FXN-203ENST00000396366 GJA5P36382 358 aa22.72■■□□□ 1.23
FXN-203ENST00000396366 TNNI2P48788 182 aa22.72■■□□□ 1.23
FXN-203ENST00000396366 CCDC102BQ68D86 513 aa22.72■■□□□ 1.23
FXN-203ENST00000396366 GNL3LQ9NVN8 582 aaKnown RBP22.72■■□□□ 1.23
FXN-203ENST00000396366 OTOFQ9HC10 1997 aa22.71■■□□□ 1.23
FXN-203ENST00000396366 SREBF2Q12772 1141 aa22.71■■□□□ 1.23
FXN-203ENST00000396366 ANKRD13AQ8IZ07 590 aa22.71■■□□□ 1.23
FXN-203ENST00000396366 ELP3Q9H9T3 547 aa22.71■■□□□ 1.23
FXN-203ENST00000396366 MAST3O60307 1309 aa22.71■■□□□ 1.23
FXN-203ENST00000396366 A0A1B0GUL7 405 aa22.7■■□□□ 1.22
FXN-203ENST00000396366 DAGLAQ9Y4D2 1042 aa22.7■■□□□ 1.22
FXN-203ENST00000396366 UNCXA6NJT0 531 aa22.69■■□□□ 1.22
FXN-203ENST00000396366 RLBP1P12271 317 aa22.69■■□□□ 1.22
FXN-203ENST00000396366 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.69■■□□□ 1.22
FXN-203ENST00000396366 ZNF296Q8WUU4 475 aaPredicted RBP22.69■■□□□ 1.22
FXN-203ENST00000396366 CNKSR2Q8WXI2 1034 aa22.69■■□□□ 1.22
FXN-203ENST00000396366 XAGE2Q96GT9 111 aa22.69■■□□□ 1.22
FXN-203ENST00000396366 DENND2AQ9ULE3 1009 aa22.69■■□□□ 1.22
FXN-203ENST00000396366 MANSC4A6NHS7 340 aaPredicted RBP22.68■■□□□ 1.22
FXN-203ENST00000396366 LDHBP07195 334 aaKnown RBP22.68■■□□□ 1.22
FXN-203ENST00000396366 ZBTB48P10074 688 aaPredicted RBP22.68■■□□□ 1.22
FXN-203ENST00000396366 RASGRF1Q13972 1273 aa22.68■■□□□ 1.22
FXN-203ENST00000396366 NEUROD6Q96NK8 337 aa22.68■■□□□ 1.22
FXN-203ENST00000396366 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
FXN-203ENST00000396366 TMOD2Q9NZR1 351 aa22.68■■□□□ 1.22
FXN-203ENST00000396366 ZBED9Q6R2W3 1325 aa22.67■■□□□ 1.22
FXN-203ENST00000396366 IGF2BP3O00425 579 aaKnown RBP eCLIP22.67■■□□□ 1.22
FXN-203ENST00000396366 SEMA3EO15041 775 aa22.67■■□□□ 1.22
FXN-203ENST00000396366 CDC42EP5Q6NZY7 148 aa22.67■■□□□ 1.22
FXN-203ENST00000396366 IFNL1Q8IU54 200 aa22.67■■□□□ 1.22
FXN-203ENST00000396366 AKAP2Q9Y2D5 859 aa22.67■■□□□ 1.22
FXN-203ENST00000396366 SALL1Q9NSC2 1324 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 GPR25O00155 361 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 MAP3K9P80192 1104 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 VGLL4Q14135 290 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 FKBP1CQ5VVH2 108 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 FAM83AQ86UY5 434 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.221e-9■■■■■ 38.8
FXN-203ENST00000396366 OPTNQ96CV9 577 aa22.66■■□□□ 1.22
FXN-203ENST00000396366 INHBEP58166 350 aa22.65■■□□□ 1.22
FXN-203ENST00000396366 TCP10Q12799 353 aa22.65■■□□□ 1.22
FXN-203ENST00000396366 NFIAQ12857 509 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms