RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 BIN1O00499 593 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 TPD52L2O43399 206 aaKnown RBP9.66□□□□□ -0.86
NDE1-202ENST00000396355 PDE1AP54750 535 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 DBN1Q16643 649 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 CEP85LQ5SZL2 805 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 FAN1Q9Y2M0 1017 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 KINO60870 393 aaKnown RBP9.66□□□□□ -0.86
NDE1-202ENST00000396355 STK3Q13188 491 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 ARID5BQ14865 1188 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 YIPF3Q9GZM5 350 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 PDGFDQ9GZP0 370 aaPredicted RBP9.66□□□□□ -0.86
NDE1-202ENST00000396355 BICC1Q9H694 974 aaKnown RBP9.66□□□□□ -0.86
NDE1-202ENST00000396355 GPBP1L1Q9HC44 474 aaPredicted RBP9.66□□□□□ -0.86
NDE1-202ENST00000396355 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■■■■■ 28.6
NDE1-202ENST00000396355 TULP2O00295 520 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 CFAP100Q494V2 611 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
NDE1-202ENST00000396355 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 AP1G2O75843 785 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 TYRO3Q06418 890 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 FLIIQ13045 1269 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 IL17REQ8NFR9 667 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 SPATA32Q96LK8 384 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 NDUFAB1O14561 156 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 PPP1R12BO60237 982 aaPredicted RBP9.65□□□□□ -0.86
NDE1-202ENST00000396355 CA8P35219 290 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 KRT85P78386 507 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
NDE1-202ENST00000396355 ODF2Q5BJF6 829 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.86
NDE1-202ENST00000396355 SPDL1Q96EA4 605 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 GBP3Q9H0R5 595 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 IL25Q9H293 177 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 DACT1Q9NYF0 836 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 BAIAP2L1Q9UHR4 511 aa9.65□□□□□ -0.86
NDE1-202ENST00000396355 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.87
NDE1-202ENST00000396355 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 HOXC9P31274 260 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 UBE2HP62256 183 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 KARSQ15046 597 aaKnown RBP9.64□□□□□ -0.87
NDE1-202ENST00000396355 MPRIPQ6WCQ1 1025 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 CEP120Q8N960 986 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 CNNM3Q8NE01 707 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 CACTINQ8WUQ7 758 aaKnown RBP9.64□□□□□ -0.87
NDE1-202ENST00000396355 TPX2Q9ULW0 747 aaKnown RBP9.64□□□□□ -0.87
NDE1-202ENST00000396355 ZDHHC9Q9Y397 364 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 A0A087WUV0 522 aaPredicted RBP9.64□□□□□ -0.87
NDE1-202ENST00000396355 GOLGA6L10A6NI86 522 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 PLSCR1O15162 318 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 LARP1BQ659C4 914 aaKnown RBP9.64□□□□□ -0.87
NDE1-202ENST00000396355 WWC2Q6AWC2 1192 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 CCNL1Q9UK58 526 aaPredicted RBP9.64□□□□□ -0.87
NDE1-202ENST00000396355 MYBL1P10243 752 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 GRIPAP1Q4V328 841 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 PTF1AQ7RTS3 328 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 ARMC2Q8NEN0 867 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.64□□□□□ -0.871e-7■■□□□ 11.9
NDE1-202ENST00000396355 WDR17Q8IZU2 1322 aa9.64□□□□□ -0.87
NDE1-202ENST00000396355 PPFIA3O75145 1194 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 CCT4P50991 539 aaKnown RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 EIF5P55010 431 aaKnown RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 FAM173BQ6P4H8 233 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 ARMC9Q7Z3E5 817 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 CPLX3Q8WVH0 158 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 TMEM165Q9HC07 324 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 PALD1Q9ULE6 856 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 NHSL1Q5SYE7 1610 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 BCAS4Q8TDM0 211 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 IBTKQ9P2D0 1353 aaPredicted RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 USP27XA6NNY8 438 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 GRIN3BO60391 1043 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 GNAI2P04899 355 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 ELF1P32519 619 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 HSPA4P34932 840 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 GNPTABQ3T906 1256 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 MICALCLQ6ZW33 695 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 THOC1Q96FV9 657 aaKnown RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 KIF9Q9HAQ2 790 aa9.63□□□□□ -0.87
NDE1-202ENST00000396355 GNL3LQ9NVN8 582 aaKnown RBP9.63□□□□□ -0.87
NDE1-202ENST00000396355 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 ERC2O15083 957 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 FOXR1Q6PIV2 292 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 PNMA8AQ86V59 439 aaPredicted RBP9.62□□□□□ -0.87
NDE1-202ENST00000396355 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 PHAXQ9H814 394 aaKnown RBP9.62□□□□□ -0.87
NDE1-202ENST00000396355 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 BUB1BO60566 1050 aaPredicted RBP9.62□□□□□ -0.87
NDE1-202ENST00000396355 HMGB1P09429 215 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms