RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
LDHC-202ENST00000396215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.41
LDHC-202ENST00000396215 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
LDHC-202ENST00000396215 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
LDHC-202ENST00000396215 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
LDHC-202ENST00000396215 GREM2Q9H772 168 aa12.49□□□□□ -0.41
LDHC-202ENST00000396215 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 AOX1Q06278 1338 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 CETPP11597 493 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 CCL5P13501 91 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 HOXD10P28358 340 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 CTGFP29279 349 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 GRK4P32298 578 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 VGLL4Q14135 290 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
LDHC-202ENST00000396215 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
LDHC-202ENST00000396215 BTBD19C9JJ37 291 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 IL1R1P14778 569 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 IGHMBP2P38935 993 aaKnown RBP12.47□□□□□ -0.41
LDHC-202ENST00000396215 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 GDF15Q99988 308 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 PHAXQ9H814 394 aaKnown RBP12.47□□□□□ -0.41
LDHC-202ENST00000396215 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 EYSQ5T1H1 3165 aa12.47□□□□□ -0.41
LDHC-202ENST00000396215 EVI5O60447 810 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.41
LDHC-202ENST00000396215 SGPL1O95470 568 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 OSBPP22059 807 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 DEFB123Q8N688 67 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
LDHC-202ENST00000396215 RNF208Q9H0X6 261 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 STAP2Q9UGK3 403 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
LDHC-202ENST00000396215 ADGRA2Q96PE1 1338 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 PSMC4P43686 418 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 UBXN2AP68543 259 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 ZNF70Q9UC06 446 aaPredicted RBP12.45□□□□□ -0.42
LDHC-202ENST00000396215 CSADQ9Y600 493 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 ARAP2Q8WZ64 1704 aa12.45□□□□□ -0.42
LDHC-202ENST00000396215 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 CHRNDQ07001 517 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 PPIL2Q13356 520 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
LDHC-202ENST00000396215 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 F8W031 263 aaPredicted RBP12.43□□□□□ -0.42
LDHC-202ENST00000396215 H7C1W4 665 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 IRF6O14896 467 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
LDHC-202ENST00000396215 CSF1RP07333 972 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 ANKRD23Q86SG2 305 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
LDHC-202ENST00000396215 ALPK3Q96L96 1907 aa12.43□□□□□ -0.42
LDHC-202ENST00000396215 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 ITGA6P23229 1130 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 KCNJ4P48050 445 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 ZNF804AQ7Z570 1209 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 MPHOSPH8Q99549 860 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 UNC93B1Q9H1C4 597 aa12.42□□□□□ -0.42
LDHC-202ENST00000396215 FMNL1O95466 1100 aaPredicted RBP12.41□□□□□ -0.42
LDHC-202ENST00000396215 TNNI2P48788 182 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 RBM5P52756 815 aaKnown RBP eCLIP12.41□□□□□ -0.42
LDHC-202ENST00000396215 PPATQ06203 517 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 Q7L0L9 218 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
LDHC-202ENST00000396215 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
LDHC-202ENST00000396215 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 TMEM39BQ9GZU3 492 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 TDRD3Q9H7E2 651 aaKnown RBP12.41□□□□□ -0.42
LDHC-202ENST00000396215 MBIPQ9NS73 344 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 CPA4Q9UI42 421 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 MAP3K2Q9Y2U5 619 aa12.41□□□□□ -0.42
LDHC-202ENST00000396215 MGAMO43451 1857 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 SNAP23O00161 211 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 GABBR2O75899 941 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 BCRP11274 1271 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 PRKCZQ05513 592 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 PXYLP1Q8TE99 480 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
LDHC-202ENST00000396215 BIN2Q9UBW5 565 aaPredicted RBP12.4□□□□□ -0.42
LDHC-202ENST00000396215 A0A1B0GUL6 1792 aa12.4□□□□□ -0.42
LDHC-202ENST00000396215 NEURL1BA8MQ27 555 aa12.39□□□□□ -0.43
LDHC-202ENST00000396215 CASP7P55210 303 aa12.39□□□□□ -0.43
LDHC-202ENST00000396215 IRF5Q13568 498 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms