RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
RAB5CP1-201ENST00000395972 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.98
RAB5CP1-201ENST00000395972 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
RAB5CP1-201ENST00000395972 LAMA3Q16787 3333 aa8.96□□□□□ -0.98
RAB5CP1-201ENST00000395972 SNED1Q8TER0 1413 aa8.96□□□□□ -0.98
RAB5CP1-201ENST00000395972 MRC1P22897 1456 aa8.96□□□□□ -0.98
RAB5CP1-201ENST00000395972 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 STARD3NLO95772 234 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 NR6A1Q15406 480 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 DESI1Q6ICB0 168 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 FAM161BQ96MY7 647 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 PTCH2Q9Y6C5 1203 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 IRS2Q9Y4H2 1338 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 KIF24Q5T7B8 1368 aa8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 KIAA0100Q14667 2235 aaKnown RBP8.95□□□□□ -0.98
RAB5CP1-201ENST00000395972 PRAMEF22A3QJZ6 481 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 FAM205CA6NFA0 338 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 BCAMP50895 628 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 FKBP1BP68106 108 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 SH3TC2Q8TF17 1288 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 GUCD1Q96NT3 240 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 TMX4Q9H1E5 349 aaPredicted RBP8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 GGA3Q9NZ52 723 aa8.94□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L3A6NCW0 530 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L4A6NCW7 530 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 TNNT2P45379 298 aaPredicted RBP8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 MMRN1Q13201 1228 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L2Q6R6M4 530 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 DNAJC14Q6Y2X3 702 aaPredicted RBP8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L1Q7RTZ2 530 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 RPGRQ92834 1020 aaKnown RBP8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 HLA-CQ95604 372 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 SHISA4Q96DD7 197 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 ZNF609O15014 1411 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 ANKRD26Q9UPS8 1709 aa8.93□□□□□ -0.98
RAB5CP1-201ENST00000395972 ROCK2O75116 1388 aaKnown RBP8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 ASTN2O75129 1339 aaPredicted RBP8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 SYNGAP1Q96PV0 1343 aa8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 PPEF1O14829 653 aaPredicted RBP8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 TCIRG1Q13488 830 aa8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 LRIT3Q3SXY7 679 aa8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 AMOTQ4VCS5 1084 aa8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 ALYREFQ86V81 257 aaKnown RBP8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 RETREG3Q86VR2 466 aa8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
RAB5CP1-201ENST00000395972 LAMB4A4D0S4 1761 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 ZBBXA8MT70 800 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L5A8MUK1 530 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 SMAPO00193 183 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 CAP1Q01518 475 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 SP3Q02447 781 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 DZIP3Q86Y13 1208 aaKnown RBP8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 SUPT20HQ8NEM7 779 aa8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 MAFAQ8NHW3 353 aaPredicted RBP8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 KHSRPQ92945 711 aaKnown RBP eCLIP8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 CLP1Q92989 425 aaKnown RBP8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 MRRFQ96E11 262 aaKnown RBP8.91□□□□□ -0.98
RAB5CP1-201ENST00000395972 SOWAHDA6NJG2 315 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L10C9JJH3 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L12C9JPN9 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L21D6R901 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 LZTS3O60299 673 aaPredicted RBP8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 BMP8BP34820 402 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 IL6STP40189 918 aaPredicted RBP8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 ANGEL2Q5VTE6 544 aaKnown RBP8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 PRAMEF18Q5VWM3 479 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 DPF2Q92785 391 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 HS3ST6Q96QI5 342 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 VPS33BQ9H267 617 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 SLC52A2Q9HAB3 445 aa8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 SCAF8Q9UPN6 1271 aaKnown RBP8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 NIP7Q9Y221 180 aaKnown RBP eCLIP8.9□□□□□ -0.98
RAB5CP1-201ENST00000395972 YDJCA8MPS7 323 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 SKIP12755 728 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 FUT2Q10981 343 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 CRHR2Q13324 411 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 ARHGEF6Q15052 776 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 GDF15Q99988 308 aa8.89□□□□□ -0.99
RAB5CP1-201ENST00000395972 RAB3GAP2Q9H2M9 1393 aa8.88□□□□□ -0.99
RAB5CP1-201ENST00000395972 CACNA1AO00555 2505 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms