RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CWC15Q9P013 229 aaKnown RBP10.6□□□□□ -0.71
RAE1-202ENST00000395840 RRP15Q9Y3B9 282 aaKnown RBP10.6□□□□□ -0.71
RAE1-202ENST00000395840 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 GNAI3P08754 354 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 TSGA10IPQ3SY00 556 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 EXOC6BQ9Y2D4 811 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 RTL9Q8NET4 1388 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 ABCC12Q96J65 1359 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 A0A0G2JLW4 131 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 H2AFXP16104 143 aaPredicted RBP10.59□□□□□ -0.71
RAE1-202ENST00000395840 TPM4P67936 248 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 UBE3BQ7Z3V4 1068 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 C1orf115Q9H7X2 142 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 KIAA1551Q9HCM1 1747 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 RAD50Q92878 1312 aa10.59□□□□□ -0.71
RAE1-202ENST00000395840 BBOX1O75936 387 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 SLU7O95391 586 aaKnown RBP10.58□□□□□ -0.72
RAE1-202ENST00000395840 NEK4P51957 841 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 TTC31Q49AM3 519 aaPredicted RBP10.58□□□□□ -0.72
RAE1-202ENST00000395840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
RAE1-202ENST00000395840 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 NLGN2Q8NFZ4 835 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 TULP1O00294 542 aaPredicted RBP10.58□□□□□ -0.72
RAE1-202ENST00000395840 KCNA3P22001 575 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 CLCN6P51797 869 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 GPS2Q13227 327 aa10.58□□□□□ -0.72
RAE1-202ENST00000395840 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
RAE1-202ENST00000395840 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
RAE1-202ENST00000395840 ATP2B1P20020 1258 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 CTSWP56202 376 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 ERCC6LQ2NKX8 1250 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 CDC5LQ99459 802 aaKnown RBP10.57□□□□□ -0.72
RAE1-202ENST00000395840 CNPY2Q9Y2B0 182 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 USP27XA6NNY8 438 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 UBTFL1P0CB47 393 aaPredicted RBP10.57□□□□□ -0.72
RAE1-202ENST00000395840 CHRNA5P30532 468 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 CASP7P55210 303 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 PTPN14Q15678 1187 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 E2F4Q16254 413 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 GPR162Q16538 588 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 DEF6Q9H4E7 631 aa10.57□□□□□ -0.72
RAE1-202ENST00000395840 EGFL6Q8IUX8 553 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 FBXO18Q8NFZ0 1043 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 CACTINQ8WUQ7 758 aaKnown RBP10.56□□□□□ -0.72
RAE1-202ENST00000395840 CXorf56Q9H5V9 222 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 CSF1RP07333 972 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 UBE2HP62256 183 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 GRAPQ13588 217 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
RAE1-202ENST00000395840 PLEKHM2Q8IWE5 1019 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 GRAPLQ8TC17 118 aaPredicted RBP10.56□□□□□ -0.72
RAE1-202ENST00000395840 USP44Q9H0E7 712 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 ZCCHC17Q9NP64 241 aaKnown RBP10.56□□□□□ -0.72
RAE1-202ENST00000395840 DONSONQ9NYP3 566 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 BRCA1P38398 1863 aaKnown RBP10.56□□□□□ -0.72
RAE1-202ENST00000395840 MYH3P11055 1940 aa10.56□□□□□ -0.72
RAE1-202ENST00000395840 TNRC6CQ9HCJ0 1690 aaKnown RBP10.56□□□□□ -0.72
RAE1-202ENST00000395840 CUL4AQ13619 759 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 RTKN2Q8IZC4 609 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 BCS1LQ9Y276 419 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
RAE1-202ENST00000395840 ARFGEF1Q9Y6D6 1849 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 COL11A2P13942 1736 aaPredicted RBP10.55□□□□□ -0.72
RAE1-202ENST00000395840 SATB1Q01826 763 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 DNAJC21Q5F1R6 531 aaKnown RBP10.55□□□□□ -0.72
RAE1-202ENST00000395840 TTC22Q5TAA0 569 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 PRPF40BQ6NWY9 871 aaKnown RBP10.55□□□□□ -0.72
RAE1-202ENST00000395840 TMED8Q6PL24 325 aaPredicted RBP10.55□□□□□ -0.72
RAE1-202ENST00000395840 LUZP1Q86V48 1076 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 TTLL11Q8NHH1 800 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 GOLGA5Q8TBA6 731 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 CCDC171Q6TFL3 1326 aa10.55□□□□□ -0.72
RAE1-202ENST00000395840 ANKRD18BA2A2Z9 1011 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 CCDC192P0DO97 292 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 NYAP1Q6ZVC0 841 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 CCDC91Q7Z6B0 441 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 SYNE4Q8N205 404 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 FAM200AQ8TCP9 573 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 TRIM5Q9C035 493 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 PPEF1O14829 653 aaPredicted RBP10.54□□□□□ -0.72
RAE1-202ENST00000395840 GNAI2P04899 355 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 IFIT5Q13325 482 aaKnown RBP10.54□□□□□ -0.72
RAE1-202ENST00000395840 CCDC57Q2TAC2 916 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 CCDC93Q567U6 631 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 SP8Q8IXZ3 490 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 SUFUQ9UMX1 484 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 ZRANB2O95218 330 aaKnown RBP eCLIP10.54□□□□□ -0.72
RAE1-202ENST00000395840 NBPF7P0C2Y1 421 aaPredicted RBP10.54□□□□□ -0.72
RAE1-202ENST00000395840 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
RAE1-202ENST00000395840 MAGEA9P43362 315 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
RAE1-202ENST00000395840 FOXO4P98177 505 aa10.54□□□□□ -0.72
RAE1-202ENST00000395840 RABL6Q3YEC7 729 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms