RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 IFIT1P09914 478 aaKnown RBP22.55■■□□□ 1.2
CXCL12-204ENST00000395793 TEPSINQ96N21 525 aa22.55■■□□□ 1.2
CXCL12-204ENST00000395793 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.55■■□□□ 1.2
CXCL12-204ENST00000395793 TNNQ9UQP3 1299 aa22.55■■□□□ 1.2
CXCL12-204ENST00000395793 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
CXCL12-204ENST00000395793 USP2O75604 605 aaPredicted RBP22.54■■□□□ 1.2
CXCL12-204ENST00000395793 TBC1D22AQ8WUA7 517 aa22.54■■□□□ 1.2
CXCL12-204ENST00000395793 PA2G4Q9UQ80 394 aaKnown RBP22.54■■□□□ 1.2
CXCL12-204ENST00000395793 TCP10L2B9ZVM9 353 aa22.53■■□□□ 1.2
CXCL12-204ENST00000395793 PPP1R12BO60237 982 aaPredicted RBP22.53■■□□□ 1.2
CXCL12-204ENST00000395793 SUPT20HL1Q3ZLR7 823 aa22.53■■□□□ 1.2
CXCL12-204ENST00000395793 LPIN2Q92539 896 aa22.53■■□□□ 1.2
CXCL12-204ENST00000395793 WNK4Q96J92 1243 aa22.53■■□□□ 1.2
CXCL12-204ENST00000395793 CIAO1O76071 339 aa22.52■■□□□ 1.2
CXCL12-204ENST00000395793 SLC5A1P13866 664 aa22.52■■□□□ 1.2
CXCL12-204ENST00000395793 GJA5P36382 358 aa22.52■■□□□ 1.2
CXCL12-204ENST00000395793 HDLBPQ00341 1268 aaKnown RBP22.52■■□□□ 1.2
CXCL12-204ENST00000395793 INTS3Q68E01 1043 aaKnown RBP22.52■■□□□ 1.2
CXCL12-204ENST00000395793 SLC10A4Q96EP9 437 aa22.52■■□□□ 1.2
CXCL12-204ENST00000395793 TMEM39BQ9GZU3 492 aa22.52■■□□□ 1.2
CXCL12-204ENST00000395793 R3HDMLQ9H3Y0 253 aa22.52■■□□□ 1.2
CXCL12-204ENST00000395793 CACNB3P54284 484 aa22.51■■□□□ 1.19
CXCL12-204ENST00000395793 SREBF2Q12772 1141 aa22.51■■□□□ 1.19
CXCL12-204ENST00000395793 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
CXCL12-204ENST00000395793 ZNF296Q8WUU4 475 aaPredicted RBP22.51■■□□□ 1.19
CXCL12-204ENST00000395793 ARHGAP45Q92619 1136 aa22.51■■□□□ 1.19
CXCL12-204ENST00000395793 FBXO3Q9UK99 471 aa22.51■■□□□ 1.19
CXCL12-204ENST00000395793 ATP2B3Q16720 1220 aa22.5■■□□□ 1.19
CXCL12-204ENST00000395793 TEKT1Q969V4 418 aa22.5■■□□□ 1.19
CXCL12-204ENST00000395793 BCAR3O75815 825 aa22.49■■□□□ 1.19
CXCL12-204ENST00000395793 IREB2P48200 963 aaKnown RBP22.49■■□□□ 1.19
CXCL12-204ENST00000395793 APOBEC3HQ6NTF7 200 aaKnown RBP22.49■■□□□ 1.19
CXCL12-204ENST00000395793 CTU1Q7Z7A3 348 aaKnown RBP22.49■■□□□ 1.19
CXCL12-204ENST00000395793 ZDHHC15Q96MV8 337 aa22.49■■□□□ 1.19
CXCL12-204ENST00000395793 GPR25O00155 361 aa22.48■■□□□ 1.19
CXCL12-204ENST00000395793 ZBTB48P10074 688 aaPredicted RBP22.48■■□□□ 1.19
CXCL12-204ENST00000395793 TRIM27P14373 513 aa22.48■■□□□ 1.19
CXCL12-204ENST00000395793 CFHR5Q9BXR6 569 aa22.48■■□□□ 1.19
CXCL12-204ENST00000395793 COPRSQ9NQ92 184 aa22.48■■□□□ 1.19
CXCL12-204ENST00000395793 CEP126Q9P2H0 1117 aa22.48■■□□□ 1.19
CXCL12-204ENST00000395793 SUGT1Q9Y2Z0 365 aa22.48■■□□□ 1.19
CXCL12-204ENST00000395793 MANSC4A6NHS7 340 aaPredicted RBP22.47■■□□□ 1.19
CXCL12-204ENST00000395793 UNCXA6NJT0 531 aa22.47■■□□□ 1.19
CXCL12-204ENST00000395793 IGF2BP3O00425 579 aaKnown RBP eCLIP22.47■■□□□ 1.19
CXCL12-204ENST00000395793 PHKA1P46020 1223 aa22.47■■□□□ 1.19
CXCL12-204ENST00000395793 RGS19P49795 217 aa22.47■■□□□ 1.19
CXCL12-204ENST00000395793 ANKRD13AQ8IZ07 590 aa22.47■■□□□ 1.19
CXCL12-204ENST00000395793 MIER1Q8N108 512 aa22.47■■□□□ 1.19
CXCL12-204ENST00000395793 MRIQ9BWK5 157 aa22.47■■□□□ 1.19
CXCL12-204ENST00000395793 ADORA1P30542 326 aa22.46■■□□□ 1.19
CXCL12-204ENST00000395793 IL15P40933 162 aaPredicted RBP22.46■■□□□ 1.19
CXCL12-204ENST00000395793 NOM1Q5C9Z4 860 aaKnown RBP22.46■■□□□ 1.19
CXCL12-204ENST00000395793 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.46■■□□□ 1.19
CXCL12-204ENST00000395793 IFNL1Q8IU54 200 aa22.46■■□□□ 1.19
CXCL12-204ENST00000395793 ELP3Q9H9T3 547 aa22.46■■□□□ 1.19
CXCL12-204ENST00000395793 MAST3O60307 1309 aa22.46■■□□□ 1.19
CXCL12-204ENST00000395793 PRDX5P30044 214 aa22.45■■□□□ 1.18
CXCL12-204ENST00000395793 TNNI2P48788 182 aa22.45■■□□□ 1.18
CXCL12-204ENST00000395793 HHIPL2Q6UWX4 724 aa22.45■■□□□ 1.18
CXCL12-204ENST00000395793 WDR66Q8TBY9 1149 aa22.45■■□□□ 1.18
CXCL12-204ENST00000395793 CNKSR2Q8WXI2 1034 aa22.45■■□□□ 1.18
CXCL12-204ENST00000395793 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.45■■□□□ 1.18
CXCL12-204ENST00000395793 MTX1Q13505 466 aa22.44■■□□□ 1.18
CXCL12-204ENST00000395793 DIXDC1Q155Q3 683 aa22.44■■□□□ 1.18
CXCL12-204ENST00000395793 ATF7IPQ6VMQ6 1270 aa22.44■■□□□ 1.18
CXCL12-204ENST00000395793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.44■■□□□ 1.18
CXCL12-204ENST00000395793 HDAC5Q9UQL6 1122 aa22.44■■□□□ 1.18
CXCL12-204ENST00000395793 DAGLAQ9Y4D2 1042 aa22.44■■□□□ 1.18
CXCL12-204ENST00000395793 MYH2Q9UKX2 1941 aa22.43■■□□□ 1.18
CXCL12-204ENST00000395793 GNAI3P08754 354 aa22.43■■□□□ 1.18
CXCL12-204ENST00000395793 VGLL4Q14135 290 aa22.43■■□□□ 1.18
CXCL12-204ENST00000395793 FRAT1Q92837 279 aaPredicted RBP22.43■■□□□ 1.18
CXCL12-204ENST00000395793 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
CXCL12-204ENST00000395793 OPTNQ96CV9 577 aa22.43■■□□□ 1.18
CXCL12-204ENST00000395793 RPAP1Q9BWH6 1393 aaPredicted RBP22.42■■□□□ 1.18
CXCL12-204ENST00000395793 SRGAP3O43295 1099 aa22.42■■□□□ 1.18
CXCL12-204ENST00000395793 INHBEP58166 350 aa22.42■■□□□ 1.18
CXCL12-204ENST00000395793 FKBP1CQ5VVH2 108 aa22.42■■□□□ 1.18
CXCL12-204ENST00000395793 FAM83AQ86UY5 434 aa22.42■■□□□ 1.18
CXCL12-204ENST00000395793 PTPN18Q99952 460 aa22.42■■□□□ 1.18
CXCL12-204ENST00000395793 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
CXCL12-204ENST00000395793 ALDH1A1P00352 501 aa22.41■■□□□ 1.18
CXCL12-204ENST00000395793 CCDC102BQ68D86 513 aa22.41■■□□□ 1.18
CXCL12-204ENST00000395793 TMOD2Q9NZR1 351 aa22.41■■□□□ 1.18
CXCL12-204ENST00000395793 TESPA1A2RU30 521 aaPredicted RBP22.4■■□□□ 1.18
CXCL12-204ENST00000395793 IPO8O15397 1037 aaKnown RBP22.4■■□□□ 1.18
CXCL12-204ENST00000395793 FKTNO75072 461 aa22.4■■□□□ 1.18
CXCL12-204ENST00000395793 TIMM10P62072 90 aa22.4■■□□□ 1.18
CXCL12-204ENST00000395793 MAP3K9P80192 1104 aa22.4■■□□□ 1.18
CXCL12-204ENST00000395793 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
CXCL12-204ENST00000395793 TFCP2Q12800 502 aa22.4■■□□□ 1.18
CXCL12-204ENST00000395793 MS4A4AQ96JQ5 239 aa22.4■■□□□ 1.18
CXCL12-204ENST00000395793 GNL3LQ9NVN8 582 aaKnown RBP22.4■■□□□ 1.18
CXCL12-204ENST00000395793 HPS5Q9UPZ3 1129 aa22.4■■□□□ 1.18
CXCL12-204ENST00000395793 AK9Q5TCS8 1911 aa22.39■■□□□ 1.18
CXCL12-204ENST00000395793 PNMA6EA0A0J9YXQ4 647 aa22.39■■□□□ 1.17
CXCL12-204ENST00000395793 SEMA3EO15041 775 aa22.39■■□□□ 1.17
CXCL12-204ENST00000395793 ZBTB22O15209 634 aa22.39■■□□□ 1.17
CXCL12-204ENST00000395793 MLLT1Q03111 559 aaPredicted RBP22.39■■□□□ 1.17
CXCL12-204ENST00000395793 RASGRF1Q13972 1273 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms