RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SCAF8Q9UPN6 1271 aaKnown RBP20.3■□□□□ 0.84
CXCL1-201ENST00000395761 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
CXCL1-201ENST00000395761 SALL1Q9NSC2 1324 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 IFIT2P09913 472 aaKnown RBP20.29■□□□□ 0.84
CXCL1-201ENST00000395761 HSPA6P17066 643 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 CRKP46108 304 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
CXCL1-201ENST00000395761 ERICH6BQ5W0A0 696 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 TBC1D9Q6ZT07 1266 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 DCPSQ96C86 337 aaKnown RBP20.29■□□□□ 0.84
CXCL1-201ENST00000395761 ZNF512BQ96KM6 892 aaPredicted RBP20.29■□□□□ 0.84
CXCL1-201ENST00000395761 SERPINA10Q9UK55 444 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
CXCL1-201ENST00000395761 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
CXCL1-201ENST00000395761 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
CXCL1-201ENST00000395761 CDC37L1Q7L3B6 337 aa20.28■□□□□ 0.84
CXCL1-201ENST00000395761 KRT26Q7Z3Y9 468 aa20.28■□□□□ 0.84
CXCL1-201ENST00000395761 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
CXCL1-201ENST00000395761 ADM5C9JUS6 153 aa20.27■□□□□ 0.84
CXCL1-201ENST00000395761 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
CXCL1-201ENST00000395761 APLP1P51693 650 aa20.27■□□□□ 0.84
CXCL1-201ENST00000395761 HDLBPQ00341 1268 aaKnown RBP20.27■□□□□ 0.84
CXCL1-201ENST00000395761 IGHDP01880 384 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 ZAP70P43403 619 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 HTRA3P83110 453 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 DIXDC1Q155Q3 683 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 TEKT1Q969V4 418 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 MRIQ9BWK5 157 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 NDUFB9Q9Y6M9 179 aa20.26■□□□□ 0.83
CXCL1-201ENST00000395761 CLRN2A0PK11 232 aa20.25■□□□□ 0.83
CXCL1-201ENST00000395761 CYP2E1P05181 493 aaPredicted RBP20.25■□□□□ 0.83
CXCL1-201ENST00000395761 SULF1Q8IWU6 871 aa20.25■□□□□ 0.83
CXCL1-201ENST00000395761 ZGPATQ8N5A5 531 aaKnown RBP20.25■□□□□ 0.83
CXCL1-201ENST00000395761 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
CXCL1-201ENST00000395761 MAST3O60307 1309 aa20.25■□□□□ 0.83
CXCL1-201ENST00000395761 PITPNM2Q9BZ72 1349 aa20.25■□□□□ 0.83
CXCL1-201ENST00000395761 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
CXCL1-201ENST00000395761 APOBEC3HQ6NTF7 200 aaKnown RBP20.24■□□□□ 0.83
CXCL1-201ENST00000395761 HHIPL2Q6UWX4 724 aa20.24■□□□□ 0.83
CXCL1-201ENST00000395761 TDRD3Q9H7E2 651 aaKnown RBP20.24■□□□□ 0.83
CXCL1-201ENST00000395761 POLR2AP24928 1970 aaKnown RBP20.24■□□□□ 0.83
CXCL1-201ENST00000395761 MECOMQ03112 1051 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 CST9Q5W186 159 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 ERICH6Q7L0X2 663 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 ZNF384Q8TF68 577 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 ZDHHC15Q96MV8 337 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 PIH1D3Q9NQM4 214 aaKnown RBP20.23■□□□□ 0.83
CXCL1-201ENST00000395761 ZNF70Q9UC06 446 aaPredicted RBP20.23■□□□□ 0.83
CXCL1-201ENST00000395761 DAGLAQ9Y4D2 1042 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 AKAP11Q9UKA4 1901 aa20.23■□□□□ 0.83
CXCL1-201ENST00000395761 MYO1BO43795 1136 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 PRAMEF18Q5VWM3 479 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
CXCL1-201ENST00000395761 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 VEZTQ9HBM0 779 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 RAI14Q9P0K7 980 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 LRP2BPQ9P2M1 347 aa20.22■□□□□ 0.83
CXCL1-201ENST00000395761 SPDYE2Q495Y8 402 aa20.21■□□□□ 0.83
CXCL1-201ENST00000395761 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
CXCL1-201ENST00000395761 OTUD7AQ8TE49 926 aaPredicted RBP20.21■□□□□ 0.83
CXCL1-201ENST00000395761 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
CXCL1-201ENST00000395761 TMEM88BA6NKF7 163 aa20.2■□□□□ 0.82
CXCL1-201ENST00000395761 CELF2O95319 508 aaKnown RBP20.2■□□□□ 0.82
CXCL1-201ENST00000395761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.2■□□□□ 0.82
CXCL1-201ENST00000395761 NSUN4Q96CB9 384 aaKnown RBP20.2■□□□□ 0.82
CXCL1-201ENST00000395761 CDCA5Q96FF9 252 aa20.2■□□□□ 0.82
CXCL1-201ENST00000395761 ATP5JP18859 108 aa20.19■□□□□ 0.82
CXCL1-201ENST00000395761 CACNB3P54284 484 aa20.19■□□□□ 0.82
CXCL1-201ENST00000395761 APOBEC3FQ8IUX4 373 aaKnown RBP20.19■□□□□ 0.82
CXCL1-201ENST00000395761 SMC5Q8IY18 1101 aa20.19■□□□□ 0.82
CXCL1-201ENST00000395761 BOLA2Q9H3K6 86 aa20.19■□□□□ 0.82
CXCL1-201ENST00000395761 CREBZFQ9NS37 354 aa20.19■□□□□ 0.82
CXCL1-201ENST00000395761 TSHZ3Q63HK5 1081 aa20.18■□□□□ 0.82
CXCL1-201ENST00000395761 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
CXCL1-201ENST00000395761 EDC3Q96F86 508 aaKnown RBP20.18■□□□□ 0.82
CXCL1-201ENST00000395761 DNAJC2Q99543 621 aaKnown RBP20.18■□□□□ 0.82
CXCL1-201ENST00000395761 DEFB129Q9H1M3 183 aa20.18■□□□□ 0.82
CXCL1-201ENST00000395761 ECHDC1Q9NTX5 307 aa20.18■□□□□ 0.82
CXCL1-201ENST00000395761 GAKO14976 1311 aa20.18■□□□□ 0.82
CXCL1-201ENST00000395761 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
CXCL1-201ENST00000395761 CDC42EP5Q6NZY7 148 aa20.17■□□□□ 0.82
CXCL1-201ENST00000395761 FAM163AQ96GL9 167 aaPredicted RBP20.17■□□□□ 0.82
CXCL1-201ENST00000395761 GOLIM4O00461 696 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 IDH1O75874 414 aaKnown RBP20.16■□□□□ 0.82
CXCL1-201ENST00000395761 GSTO1P78417 241 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 RASA3Q14644 834 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 HAUS7Q99871 368 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 USP40Q9NVE5 1235 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 MROH7-TTC4A0A0A0MT08 1334 aa20.16■□□□□ 0.82
CXCL1-201ENST00000395761 GPR75-ASB3A0A0A6YYF3 556 aa20.15■□□□□ 0.82
CXCL1-201ENST00000395761 LDHCP07864 332 aa20.15■□□□□ 0.82
CXCL1-201ENST00000395761 NAA16Q6N069 864 aaPredicted RBP20.15■□□□□ 0.82
CXCL1-201ENST00000395761 ADGRA1Q86SQ6 560 aa20.15■□□□□ 0.82
CXCL1-201ENST00000395761 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
CXCL1-201ENST00000395761 ECM29Q5VYK3 1845 aa20.15■□□□□ 0.82
CXCL1-201ENST00000395761 MYH2Q9UKX2 1941 aa20.14■□□□□ 0.81
CXCL1-201ENST00000395761 CNTNAP1P78357 1384 aa20.14■□□□□ 0.81
CXCL1-201ENST00000395761 BTDP43251 543 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms