RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MAST3O60307 1309 aa16.53■□□□□ 0.24
CLIP2-203ENST00000395060 NLRP12P59046 1061 aa16.53■□□□□ 0.24
CLIP2-203ENST00000395060 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
CLIP2-203ENST00000395060 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
CLIP2-203ENST00000395060 EXOSC10Q01780 885 aaKnown RBP16.53■□□□□ 0.24
CLIP2-203ENST00000395060 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
CLIP2-203ENST00000395060 IMPACTQ9P2X3 320 aa16.53■□□□□ 0.24
CLIP2-203ENST00000395060 PRC1O43663 620 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 PUF60Q9UHX1 559 aaKnown RBP16.52■□□□□ 0.24
CLIP2-203ENST00000395060 TRIM65Q6PJ69 517 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 TOGARAM2Q6ZUX3 1019 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 CREBRFQ8IUR6 639 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 METTL22Q9BUU2 404 aaPredicted RBP16.52■□□□□ 0.24
CLIP2-203ENST00000395060 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
CLIP2-203ENST00000395060 LZTFL1Q9NQ48 299 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 FAM53CQ9NYF3 392 aa16.52■□□□□ 0.24
CLIP2-203ENST00000395060 LTN1O94822 1766 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 A0A0U1RQJ8 604 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 HMGB1P09429 215 aaKnown RBP16.52■□□□□ 0.23
CLIP2-203ENST00000395060 RFX5P48382 616 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-203ENST00000395060 LMAN1P49257 510 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 MTF1Q14872 753 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 ANO1Q5XXA6 986 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 GRAMD1CQ8IYS0 662 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.23
CLIP2-203ENST00000395060 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-203ENST00000395060 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
CLIP2-203ENST00000395060 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-203ENST00000395060 COBLO75128 1261 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 MCM6Q14566 821 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 KCNG4Q8TDN1 519 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 CDC27P30260 824 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 RAD51AP2Q09MP3 1159 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 C10orf67Q8IYJ2 551 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 PARP3Q9Y6F1 533 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 NFAT5O94916 1531 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 NEDD4P46934 1319 aa16.51■□□□□ 0.23
CLIP2-203ENST00000395060 TADA3O75528 432 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 APPP05067 770 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 CASQ1P31415 396 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 PDE4BQ07343 736 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 HSD3B7Q9H2F3 369 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 INCENPQ9NQS7 918 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 CHD2O14647 1828 aaKnown RBP16.5■□□□□ 0.23
CLIP2-203ENST00000395060 TRIM66O15016 1216 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
CLIP2-203ENST00000395060 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 PPP2R2CQ9Y2T4 447 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 ANKRD65E5RJM6 399 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 PHACTR2O75167 634 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 REXO1L1PQ8IX06 675 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
CLIP2-203ENST00000395060 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
CLIP2-203ENST00000395060 DHX58Q96C10 678 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 MYL5Q02045 173 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 LONRF3Q496Y0 759 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 CCDC12Q8WUD4 166 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-203ENST00000395060 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 SENP2Q9HC62 589 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-203ENST00000395060 CRYBG1Q9Y4K1 1723 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 SALL1Q9NSC2 1324 aa16.49■□□□□ 0.23
CLIP2-203ENST00000395060 TBC1D8O95759 1140 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 ADORA1P30542 326 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-203ENST00000395060 KLHL10Q6JEL2 608 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 PARD6BQ9BYG5 372 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 LCMT1Q9UIC8 334 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 ZRANB2O95218 330 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLIP2-203ENST00000395060 FGAP02671 866 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 ALG1Q9BT22 464 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 PCDHA5Q9Y5H7 936 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 A0A1B0GUL7 405 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 TATP17735 454 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-203ENST00000395060 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-203ENST00000395060 SHC4Q6S5L8 630 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 FOXP4Q8IVH2 680 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-203ENST00000395060 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
CLIP2-203ENST00000395060 KIF23Q02241 960 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 LRRFIP1Q32MZ4 808 aaKnown RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 ZMYM1Q5SVZ6 1142 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 ZNF274Q96GC6 653 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 BAG1Q99933 345 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 UTYO14607 1347 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms