RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 FGRP09769 529 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 DDX11Q96FC9 970 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
HIF1A-203ENST00000394997 HSP90AB3PQ58FF7 597 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 PSME4Q14997 1843 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 OFD1O75665 1012 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 IQCB1Q15051 598 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 UVSSAQ2YD98 709 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 TSPY26PQ9H489 355 aa12.1□□□□□ -0.47
HIF1A-203ENST00000394997 GPAA1O43292 621 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
HIF1A-203ENST00000394997 LARP1BQ659C4 914 aaKnown RBP12.09□□□□□ -0.47
HIF1A-203ENST00000394997 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 TSC1Q92574 1164 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 ZKSCAN5Q9Y2L8 839 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 STARD3NLO95772 234 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 MAP3K14Q99558 947 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 GPTP24298 496 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 CDC27P30260 824 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
HIF1A-203ENST00000394997 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
HIF1A-203ENST00000394997 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 PNPLA7Q6ZV29 1317 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 SH2B2O14492 632 aaPredicted RBP12.08□□□□□ -0.47
HIF1A-203ENST00000394997 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.47
HIF1A-203ENST00000394997 SIK1P57059 783 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.47
HIF1A-203ENST00000394997 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 ZNF830Q96NB3 372 aaPredicted RBP12.08□□□□□ -0.47
HIF1A-203ENST00000394997 LY9Q9HBG7 655 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.47
HIF1A-203ENST00000394997 MROH7-TTC4A0A0A0MT08 1334 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 FIBPO43427 364 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 ATP2B3Q16720 1220 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 CLSTN2Q9H4D0 955 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 SPTLC3Q9NUV7 552 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 STK3Q13188 491 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 ARFGEF1Q9Y6D6 1849 aa12.08□□□□□ -0.48
HIF1A-203ENST00000394997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 PDE6AP16499 860 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 EVX2Q03828 476 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 IFIT5Q13325 482 aaKnown RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 CCDC57Q2TAC2 916 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 FERMT3Q86UX7 667 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 SGMS1Q86VZ5 419 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 USP28Q96RU2 1077 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 PTPAQ15257 358 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 NEUROD6Q96NK8 337 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 KDM4AO75164 1064 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 FUT2Q10981 343 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-203ENST00000394997 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 ZNF532Q9HCE3 1301 aa12.07□□□□□ -0.48
HIF1A-203ENST00000394997 GOLGA6L4A6NEF3 574 aa12.06□□□□□ -0.48
HIF1A-203ENST00000394997 EVA1CP58658 441 aa12.06□□□□□ -0.48
HIF1A-203ENST00000394997 FMR1NBQ8N0W7 255 aaPredicted RBP12.06□□□□□ -0.48
HIF1A-203ENST00000394997 RBBP6Q7Z6E9 1792 aaKnown RBP12.06□□□□□ -0.48
HIF1A-203ENST00000394997 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
HIF1A-203ENST00000394997 LPIN2Q92539 896 aa12.06□□□□□ -0.48
HIF1A-203ENST00000394997 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
HIF1A-203ENST00000394997 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
HIF1A-203ENST00000394997 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
HIF1A-203ENST00000394997 EXOC5O00471 708 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 PUM3Q15397 648 aaKnown RBP12.05□□□□□ -0.48
HIF1A-203ENST00000394997 SASS6Q6UVJ0 657 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 DHX40Q8IX18 779 aaKnown RBP12.05□□□□□ -0.48
HIF1A-203ENST00000394997 HPSEQ9Y251 543 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 NPY5RQ15761 445 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
HIF1A-203ENST00000394997 SEC23AQ15436 765 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
HIF1A-203ENST00000394997 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
HIF1A-203ENST00000394997 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 TDRD7Q8NHU6 1098 aaKnown RBP12.05□□□□□ -0.48
HIF1A-203ENST00000394997 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
HIF1A-203ENST00000394997 MYH8P13535 1937 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 KLRK1P26718 216 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms