RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SUCLG2Q96I99 432 aa26.7■■□□□ 1.86
TRAF4-203ENST00000394925 EFCC1Q9HA90 598 aa26.7■■□□□ 1.86
TRAF4-203ENST00000394925 SP3Q02447 781 aa26.69■■□□□ 1.86
TRAF4-203ENST00000394925 TEPSINQ96N21 525 aa26.69■■□□□ 1.86
TRAF4-203ENST00000394925 CRKP46108 304 aa26.68■■□□□ 1.86
TRAF4-203ENST00000394925 CNKSR2Q8WXI2 1034 aa26.68■■□□□ 1.86
TRAF4-203ENST00000394925 KAZALD1Q96I82 304 aa26.68■■□□□ 1.86
TRAF4-203ENST00000394925 TMEM39BQ9GZU3 492 aa26.68■■□□□ 1.86
TRAF4-203ENST00000394925 IQSEC3Q9UPP2 1182 aaPredicted RBP26.68■■□□□ 1.86
TRAF4-203ENST00000394925 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.67■■□□□ 1.86
TRAF4-203ENST00000394925 MS4A4AQ96JQ5 239 aa26.67■■□□□ 1.86
TRAF4-203ENST00000394925 RIPOR2Q9Y4F9 1068 aa26.67■■□□□ 1.86
TRAF4-203ENST00000394925 ARAP2Q8WZ64 1704 aa26.67■■□□□ 1.86
TRAF4-203ENST00000394925 TNNI2P48788 182 aa26.66■■□□□ 1.86
TRAF4-203ENST00000394925 CAP1Q01518 475 aa26.66■■□□□ 1.86
TRAF4-203ENST00000394925 GRIK5Q16478 980 aa26.66■■□□□ 1.86
TRAF4-203ENST00000394925 VPS37DQ86XT2 251 aa26.66■■□□□ 1.86
TRAF4-203ENST00000394925 MROH5Q6ZUA9 1318 aa26.65■■□□□ 1.86
TRAF4-203ENST00000394925 NBPF7P0C2Y1 421 aaPredicted RBP26.65■■□□□ 1.86
TRAF4-203ENST00000394925 MAP3K9P80192 1104 aa26.65■■□□□ 1.86
TRAF4-203ENST00000394925 CHAF1AQ13111 956 aaPredicted RBP26.65■■□□□ 1.86
TRAF4-203ENST00000394925 VGLL4Q14135 290 aa26.65■■□□□ 1.86
TRAF4-203ENST00000394925 BRI3BPQ8WY22 251 aa26.65■■□□□ 1.86
TRAF4-203ENST00000394925 FBXO33Q7Z6M2 555 aa26.64■■□□□ 1.86
TRAF4-203ENST00000394925 ARMC5Q96C12 935 aa26.64■■□□□ 1.86
TRAF4-203ENST00000394925 CCL15-CCL14A0A0B4J2E2 113 aa26.63■■□□□ 1.85
TRAF4-203ENST00000394925 ANP32CO43423 234 aa26.63■■□□□ 1.85
TRAF4-203ENST00000394925 FRAT2O75474 233 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-203ENST00000394925 TAF1CQ15572 869 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-203ENST00000394925 CCL15Q16663 113 aa26.63■■□□□ 1.85
TRAF4-203ENST00000394925 GCC1Q96CN9 775 aa26.63■■□□□ 1.85
TRAF4-203ENST00000394925 CSADQ9Y600 493 aa26.63■■□□□ 1.85
TRAF4-203ENST00000394925 RBBP6Q7Z6E9 1792 aaKnown RBP26.62■■□□□ 1.85
TRAF4-203ENST00000394925 GTF2A2P52657 109 aa26.62■■□□□ 1.85
TRAF4-203ENST00000394925 CACNB3P54284 484 aa26.62■■□□□ 1.85
TRAF4-203ENST00000394925 LRRC24Q50LG9 513 aa26.62■■□□□ 1.85
TRAF4-203ENST00000394925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.62■■□□□ 1.851e-6■□□□□ 8.2
TRAF4-203ENST00000394925 OTUD5Q96G74 571 aa26.62■■□□□ 1.85
TRAF4-203ENST00000394925 BICC1Q9H694 974 aaKnown RBP26.62■■□□□ 1.85
TRAF4-203ENST00000394925 ZFYVE28Q9HCC9 887 aa26.62■■□□□ 1.85
TRAF4-203ENST00000394925 EN2P19622 333 aaPredicted RBP26.61■■□□□ 1.85
TRAF4-203ENST00000394925 CAVIN4Q5BKX8 364 aa26.61■■□□□ 1.85
TRAF4-203ENST00000394925 METTL24Q5JXM2 366 aa26.61■■□□□ 1.85
TRAF4-203ENST00000394925 BRCA2P51587 3418 aa26.61■■□□□ 1.85
TRAF4-203ENST00000394925 FAM43AQ8N2R8 423 aa26.6■■□□□ 1.85
TRAF4-203ENST00000394925 TBC1D22AQ8WUA7 517 aa26.6■■□□□ 1.85
TRAF4-203ENST00000394925 UTYO14607 1347 aa26.6■■□□□ 1.85
TRAF4-203ENST00000394925 HDLBPQ00341 1268 aaKnown RBP26.59■■□□□ 1.85
TRAF4-203ENST00000394925 RABL6Q3YEC7 729 aaPredicted RBP26.59■■□□□ 1.85
TRAF4-203ENST00000394925 TEKT1Q969V4 418 aa26.59■■□□□ 1.85
TRAF4-203ENST00000394925 ARHGEF6Q15052 776 aa26.58■■□□□ 1.85
TRAF4-203ENST00000394925 ANKRD44Q8N8A2 993 aa26.58■■□□□ 1.85
TRAF4-203ENST00000394925 SPDYE5A6NIY4 337 aa26.57■■□□□ 1.84
TRAF4-203ENST00000394925 PDE8BO95263 885 aa26.57■■□□□ 1.84
TRAF4-203ENST00000394925 BCAMP50895 628 aa26.57■■□□□ 1.84
TRAF4-203ENST00000394925 FAM9BQ8IZU0 186 aa26.57■■□□□ 1.84
TRAF4-203ENST00000394925 TMEM106CQ9BVX2 250 aa26.57■■□□□ 1.84
TRAF4-203ENST00000394925 PTCH2Q9Y6C5 1203 aa26.57■■□□□ 1.84
TRAF4-203ENST00000394925 SLC9C1Q4G0N8 1177 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 VGLL2Q8N8G2 317 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 KLHDC4Q8TBB5 520 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 ZNF333Q96JL9 665 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 WRNIP1Q96S55 665 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 TMOD2Q9NZR1 351 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 SNCAIPQ9Y6H5 919 aa26.56■■□□□ 1.84
TRAF4-203ENST00000394925 ZKSCAN4Q969J2 545 aaPredicted RBP26.55■■□□□ 1.84
TRAF4-203ENST00000394925 ZDHHC15Q96MV8 337 aa26.55■■□□□ 1.84
TRAF4-203ENST00000394925 WDHD1O75717 1129 aaPredicted RBP26.54■■□□□ 1.84
TRAF4-203ENST00000394925 HABP4Q5JVS0 413 aaKnown RBP26.54■■□□□ 1.84
TRAF4-203ENST00000394925 NBPF11Q86T75 865 aa26.54■■□□□ 1.84
TRAF4-203ENST00000394925 ERO1BQ86YB8 467 aa26.54■■□□□ 1.84
TRAF4-203ENST00000394925 CETPP11597 493 aa26.53■■□□□ 1.84
TRAF4-203ENST00000394925 APOBEC3HQ6NTF7 200 aaKnown RBP26.53■■□□□ 1.84
TRAF4-203ENST00000394925 FAM83AQ86UY5 434 aa26.53■■□□□ 1.84
TRAF4-203ENST00000394925 MRPL50Q8N5N7 158 aaKnown RBP26.53■■□□□ 1.84
TRAF4-203ENST00000394925 MRIQ9BWK5 157 aa26.53■■□□□ 1.84
TRAF4-203ENST00000394925 IRF6O14896 467 aa26.52■■□□□ 1.84
TRAF4-203ENST00000394925 HOOK2Q96ED9 719 aa26.52■■□□□ 1.84
TRAF4-203ENST00000394925 MAST3O60307 1309 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 BTBD19C9JJ37 291 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 TLR2O60603 784 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 MYCP01106 439 aaPredicted RBP26.51■■□□□ 1.83
TRAF4-203ENST00000394925 SNAPC2Q13487 334 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 SLC4A8Q2Y0W8 1093 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 FKBP1CQ5VVH2 108 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 ARHGAP39Q9C0H5 1083 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 SUGT1Q9Y2Z0 365 aa26.51■■□□□ 1.83
TRAF4-203ENST00000394925 IFIT1P09914 478 aaKnown RBP26.5■■□□□ 1.83
TRAF4-203ENST00000394925 KIF22Q14807 665 aa26.5■■□□□ 1.83
TRAF4-203ENST00000394925 PUM3Q15397 648 aaKnown RBP26.5■■□□□ 1.83
TRAF4-203ENST00000394925 ZSWIM8A7E2V4 1837 aa26.5■■□□□ 1.83
TRAF4-203ENST00000394925 FGFR2P21802 821 aa26.49■■□□□ 1.83
TRAF4-203ENST00000394925 PPIL2Q13356 520 aa26.49■■□□□ 1.83
TRAF4-203ENST00000394925 DCAF15Q66K64 600 aa26.49■■□□□ 1.83
TRAF4-203ENST00000394925 HHIPL2Q6UWX4 724 aa26.49■■□□□ 1.83
TRAF4-203ENST00000394925 MIGA2Q7L4E1 593 aa26.49■■□□□ 1.83
TRAF4-203ENST00000394925 ZCCHC17Q9NP64 241 aaKnown RBP26.49■■□□□ 1.83
TRAF4-203ENST00000394925 LACTBP83111 547 aaPredicted RBP26.48■■□□□ 1.83
TRAF4-203ENST00000394925 SH3TC2Q8TF17 1288 aa26.48■■□□□ 1.83
TRAF4-203ENST00000394925 ZNF341Q9BYN7 854 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms