RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 KDM5CP41229 1560 aa16.41■□□□□ 0.22
PPARGC1B-203ENST00000394320 KIF1BO60333 1816 aa16.41■□□□□ 0.22
PPARGC1B-203ENST00000394320 SPAG5Q96R06 1193 aa16.41■□□□□ 0.22
PPARGC1B-203ENST00000394320 SLC27A2O14975 620 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 GPAA1O43292 621 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 AKR1B10O60218 316 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 KDM2BQ8NHM5 1336 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 AFMP43652 599 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 BICD1Q96G01 975 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 CENPHQ9H3R5 247 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 CHD1O14646 1710 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 ANKRD62A6NC57 917 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 H0YIN7 160 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 USP6P35125 1406 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 FMNL3Q8IVF7 1028 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
PPARGC1B-203ENST00000394320 ANO6Q4KMQ2 910 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 STK24Q9Y6E0 443 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 ENOX2Q16206 610 aaKnown RBP16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 HS2ST1Q7LGA3 356 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
PPARGC1B-203ENST00000394320 PNMA6EA0A0J9YXQ4 647 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 TET3O43151 1660 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 LIG1P18858 919 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 PAXBP1Q9Y5B6 917 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 SYT1P21579 422 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 USP8P40818 1118 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 PRPHP41219 470 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 PLCD1P51178 756 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 TAX1BP1Q86VP1 789 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 DHX58Q96C10 678 aa16.38■□□□□ 0.21
PPARGC1B-203ENST00000394320 FERMT1Q9BQL6 677 aa16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 CTSWP56202 376 aa16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 ELP1O95163 1332 aa16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 HOOK3Q86VS8 718 aa16.37■□□□□ 0.21
PPARGC1B-203ENST00000394320 CGNQ9P2M7 1197 aaKnown RBP16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 ZBTB38Q8NAP3 1195 aaPredicted RBP16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 USP44Q9H0E7 712 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 ABCC3O15438 1527 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 B4E1Z4 1266 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 RBM10P98175 930 aaKnown RBP16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 TYRO3Q06418 890 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 DDX12PQ92771 950 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 CKAP4Q07065 602 aaKnown RBP16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 ZNF594Q96JF6 807 aaPredicted RBP16.36■□□□□ 0.21
PPARGC1B-203ENST00000394320 NOP2P46087 812 aaKnown RBP16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 ISM2Q6H9L7 571 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 IMPG2Q9BZV3 1241 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 ADCY10Q96PN6 1610 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 TMCO5BA8MYB1 307 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 FAM13AO94988 1023 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 FAM193AP78312 1265 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 CTNNA2P26232 953 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 TRMT1Q9NXH9 659 aaKnown RBP16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 OTUD7AQ8TE49 926 aaPredicted RBP16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
PPARGC1B-203ENST00000394320 NCBP1Q09161 790 aaKnown RBP16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 C16orf45Q96MC5 204 aaPredicted RBP16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 TTC12Q9H892 705 aaPredicted RBP16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 MYZAPP0CAP1 466 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 BAG6P46379 1132 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 AOPEPQ8N6M6 819 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 CCDC91Q7Z6B0 441 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 DKC1O60832 514 aaKnown RBP eCLIP16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 HSPA4P34932 840 aa16.34■□□□□ 0.21
PPARGC1B-203ENST00000394320 IBSPP21815 317 aaPredicted RBP16.33■□□□□ 0.21
PPARGC1B-203ENST00000394320 KRT83P78385 493 aa16.33■□□□□ 0.21
PPARGC1B-203ENST00000394320 DDX17Q92841 729 aaKnown RBP16.33■□□□□ 0.21
PPARGC1B-203ENST00000394320 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms