RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ZNF397Q8NF99 534 aaPredicted RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 EEF2KMTQ96G04 330 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 PLEKHA4Q9H4M7 779 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 EXOC1Q9NV70 894 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 PRDM15P57071 1507 aaPredicted RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 CPXCR1Q8N123 301 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 EFCAB6Q5THR3 1501 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 PLXNC1O60486 1568 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 TMCO5BA8MYB1 307 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 TCP10L2B9ZVM9 353 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 EYA2O00167 538 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 XRCC6P12956 609 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH11-202ENST00000394156 PUM3Q15397 648 aaKnown RBP10.43□□□□□ -0.74
CDH11-202ENST00000394156 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
CDH11-202ENST00000394156 KDM2BQ8NHM5 1336 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 KRT2P35908 639 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 SPATA5Q8NB90 893 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 INCENPQ9NQS7 918 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 HMG20BQ9P0W2 317 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 RTL1A6NKG5 1358 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 CTSWP56202 376 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 GSTO1P78417 241 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 SMARCC2Q8TAQ2 1214 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 SMARCC1Q92922 1105 aaPredicted RBP10.43□□□□□ -0.74
CDH11-202ENST00000394156 CAPZA3Q96KX2 299 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 SYT1P21579 422 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 ANTXR1Q9H6X2 564 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 VPS54Q9P1Q0 977 aa10.43□□□□□ -0.74
CDH11-202ENST00000394156 SNAP25P60880 206 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 ASIC1P78348 528 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 QTRT2Q9H974 415 aaKnown RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 CD2BP2O95400 341 aaKnown RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 SPA17Q15506 151 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 BLZF1Q9H2G9 400 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 CSPG5O95196 566 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 LDHCP07864 332 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 RNASE9P60153 205 aaKnown RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 LRSAM1Q6UWE0 723 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 KIAA0825Q8IV33 1275 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 M0R2C6 588 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 MYCLP12524 364 aaPredicted RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 CRKLP46109 303 aaKnown RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 ERFEQ4G0M1 354 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 DPP8Q6V1X1 898 aaPredicted RBP10.42□□□□□ -0.74
CDH11-202ENST00000394156 CCDC186Q7Z3E2 898 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 GINS2Q9Y248 185 aa10.42□□□□□ -0.74
CDH11-202ENST00000394156 PTPROQ16827 1216 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 DHX32Q7L7V1 743 aaKnown RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 EAF2Q96CJ1 260 aaPredicted RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 ZBTB1Q9Y2K1 713 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 MYCP01106 439 aaPredicted RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 LRRC47Q8N1G4 583 aaKnown RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 GGA1Q9UJY5 639 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 BCS1LQ9Y276 419 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 ME3Q16798 604 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 PLCD4Q9BRC7 762 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 BLMP54132 1417 aaPredicted RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 KDM5DQ9BY66 1539 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 CYP2D7A0A087X1C5 515 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 N4BP3O15049 544 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 SPTLC2O15270 562 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 DYNLL1P63167 89 aaKnown RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
CDH11-202ENST00000394156 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 SH3TC1Q8TE82 1336 aa10.41□□□□□ -0.74
CDH11-202ENST00000394156 CLRN2A0PK11 232 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 POLR2DO15514 142 aaKnown RBP10.4□□□□□ -0.74
CDH11-202ENST00000394156 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 TXKP42681 527 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 PHKA1P46020 1223 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 DCAF17Q5H9S7 520 aaPredicted RBP10.4□□□□□ -0.74
CDH11-202ENST00000394156 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 ZNF589Q86UQ0 364 aaPredicted RBP10.4□□□□□ -0.74
CDH11-202ENST00000394156 TSPYL1Q9H0U9 437 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 IFNKQ9P0W0 207 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.74
CDH11-202ENST00000394156 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
CDH11-202ENST00000394156 TTC41PQ6P2S7 1318 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 TYRO3Q06418 890 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 ADCK5Q3MIX3 580 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 E9PCH4 1651 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.74
CDH11-202ENST00000394156 IGSF3O75054 1194 aa10.4□□□□□ -0.75
CDH11-202ENST00000394156 HLFQ16534 295 aa10.4□□□□□ -0.75
CDH11-202ENST00000394156 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.75
CDH11-202ENST00000394156 LZTFL1Q9NQ48 299 aa10.4□□□□□ -0.75
CDH11-202ENST00000394156 HDAC9Q9UKV0 1011 aa10.4□□□□□ -0.75
CDH11-202ENST00000394156 CCDC191Q8NCU4 936 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms