RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 LCORLQ8N3X6 602 aa13.02□□□□□ -0.32
PDGFD-202ENST00000393158 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.32
PDGFD-202ENST00000393158 REC8O95072 547 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 GSG1L2A8MUP6 293 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 NFKBIEO00221 500 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 SNX21Q969T3 373 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 PCNTO95613 3336 aa13.02□□□□□ -0.33
PDGFD-202ENST00000393158 HIP1O00291 1037 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 GPAA1O43292 621 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 CREB3L3Q68CJ9 461 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 C21orf2O43822 256 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 ANAPC15P60006 121 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 TTF1Q15361 905 aaPredicted RBP13.01□□□□□ -0.33
PDGFD-202ENST00000393158 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDGFD-202ENST00000393158 NPHP1O15259 732 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 PRKAB2O43741 272 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 CPA1P15085 419 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 MPNDQ8N594 471 aa13.01□□□□□ -0.33
PDGFD-202ENST00000393158 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 PSMD1Q99460 953 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 ZFYP08048 801 aaPredicted RBP13□□□□□ -0.33
PDGFD-202ENST00000393158 WASHC4Q2M389 1173 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 GAKO14976 1311 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 FGAP02671 866 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 GORABQ5T7V8 394 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 CNKSR1Q969H4 720 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
PDGFD-202ENST00000393158 DACT2Q5SW24 774 aa12.99□□□□□ -0.33
PDGFD-202ENST00000393158 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
PDGFD-202ENST00000393158 IDH1O75874 414 aaKnown RBP12.99□□□□□ -0.33
PDGFD-202ENST00000393158 DYNLL1P63167 89 aaKnown RBP12.99□□□□□ -0.33
PDGFD-202ENST00000393158 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
PDGFD-202ENST00000393158 TTLL6Q8N841 843 aa12.99□□□□□ -0.33
PDGFD-202ENST00000393158 RHBDL3P58872 404 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 AOC3Q16853 763 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 COA1Q9GZY4 146 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 GMLQ99445 158 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
PDGFD-202ENST00000393158 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-202ENST00000393158 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 TOB2Q14106 344 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-202ENST00000393158 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 INCENPQ9NQS7 918 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 LARGE1O95461 756 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 ALX1Q15699 326 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 ZNF804AQ7Z570 1209 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 ATAD5Q96QE3 1844 aa12.97□□□□□ -0.33
PDGFD-202ENST00000393158 MBD4O95243 580 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 ANTXR2P58335 489 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
PDGFD-202ENST00000393158 MIGA1Q8NAN2 632 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 FGRP09769 529 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 TM6SF1Q9BZW5 370 aa12.96□□□□□ -0.33
PDGFD-202ENST00000393158 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.34
PDGFD-202ENST00000393158 ECE2O60344 883 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 KCNJ4P48050 445 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 TCHHQ07283 1943 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 SDR42E1Q8WUS8 393 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
PDGFD-202ENST00000393158 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-202ENST00000393158 LTBP3Q9NS15 1303 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 PPP4CP60510 307 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-202ENST00000393158 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
PDGFD-202ENST00000393158 GPR75-ASB3A0A0A6YYF3 556 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 PDE4CQ08493 712 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 MAP3K12Q12852 859 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 IFNL3Q8IZI9 196 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 MROH7-TTC4A0A0A0MT08 1334 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 NEDD4P46934 1319 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 FKBP1AP62942 108 aaKnown RBP12.94□□□□□ -0.34
PDGFD-202ENST00000393158 ZMYND15Q9H091 742 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
PDGFD-202ENST00000393158 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
PDGFD-202ENST00000393158 E7EWF7 191 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 GTF2IP78347 998 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 RABEP1Q15276 862 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms