RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 RCOR1Q9UKL0 485 aa16.77■□□□□ 0.28
MKS1-203ENST00000393120 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
MKS1-203ENST00000393120 DOCK2Q92608 1830 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 IFNL3Q8IZI9 196 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
MKS1-203ENST00000393120 NYXQ9GZU5 481 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
MKS1-203ENST00000393120 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
MKS1-203ENST00000393120 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 LIG1P18858 919 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 GIMAP6Q6P9H5 292 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 PGBD1Q96JS3 809 aa16.76■□□□□ 0.27
MKS1-203ENST00000393120 GNL3LQ9NVN8 582 aaKnown RBP16.76■□□□□ 0.27
MKS1-203ENST00000393120 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
MKS1-203ENST00000393120 MBD4O95243 580 aa16.75■□□□□ 0.27
MKS1-203ENST00000393120 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
MKS1-203ENST00000393120 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
MKS1-203ENST00000393120 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 TBC1D9BQ66K14 1250 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 C3orf67Q6ZVT6 689 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 CNNM2Q9H8M5 875 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
MKS1-203ENST00000393120 CCDC192P0DO97 292 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 NACAP1Q9BZK3 213 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 NAPBQ9H115 298 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 USP21Q9UK80 565 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 MINPP1Q9UNW1 487 aa16.74■□□□□ 0.27
MKS1-203ENST00000393120 SCN7AQ01118 1682 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 LIFRP42702 1097 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 FBXO18Q8NFZ0 1043 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 CLSTN2Q9H4D0 955 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 ARMT1Q9H993 441 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 DACT1Q9NYF0 836 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
MKS1-203ENST00000393120 THSD7AQ9UPZ6 1657 aa16.73■□□□□ 0.27
MKS1-203ENST00000393120 CPLX1O14810 134 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 ZBTB22O15209 634 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 LRP2BPQ9P2M1 347 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 ORC3Q9UBD5 711 aaPredicted RBP16.72■□□□□ 0.27
MKS1-203ENST00000393120 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 MYO5AQ9Y4I1 1855 aaKnown RBP16.72■□□□□ 0.27
MKS1-203ENST00000393120 SEMA3EO15041 775 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 CDKL5O76039 1030 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
MKS1-203ENST00000393120 AKNAD1Q5T1N1 836 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
MKS1-203ENST00000393120 C8orf76Q96K31 380 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 KRT23Q9C075 422 aa16.72■□□□□ 0.27
MKS1-203ENST00000393120 NEDD4P46934 1319 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 B4E1Z4 1266 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 KCNQ4P56696 695 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 CAVIN4Q5BKX8 364 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 APOA5Q6Q788 366 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 TNMDQ9H2S6 317 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 RTEL1Q9NZ71 1219 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 DENND2AQ9ULE3 1009 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 COL4A1P02462 1669 aa16.71■□□□□ 0.27
MKS1-203ENST00000393120 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 ZPR1O75312 459 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 BRAPQ7Z569 592 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 BICD2Q8TD16 824 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 LY9Q9HBG7 655 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
MKS1-203ENST00000393120 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 BICDL1Q6ZP65 573 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 FBXO33Q7Z6M2 555 aa16.7■□□□□ 0.26
MKS1-203ENST00000393120 CELF1Q92879 486 aaKnown RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 FAM84BQ96KN1 310 aaPredicted RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 RTCBQ9Y3I0 505 aaKnown RBP16.7■□□□□ 0.26
MKS1-203ENST00000393120 GNPATO15228 680 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 KDM4AO75164 1064 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 NR1I2O75469 434 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 GYG1P46976 350 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 TMED8Q6PL24 325 aaPredicted RBP16.69■□□□□ 0.26
MKS1-203ENST00000393120 MFSD6Q6ZSS7 791 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
MKS1-203ENST00000393120 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 ZSWIM5Q9P217 1185 aa16.69■□□□□ 0.26
MKS1-203ENST00000393120 NID2Q14112 1375 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms